VOL. 6 · NO. 3 | September 2012
 
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Frontmatter
Ann. Appl. Stat. 6 (3), (September 2012)
No abstract available
Ann. Appl. Stat. 6 (3), (September 2012)
No abstract available
Articles
Peter G. M. van der Heijden, Joe Whittaker, Maarten Cruyff, Bart Bakker, Rik van der Vliet
Ann. Appl. Stat. 6 (3), 831-852, (September 2012) DOI: 10.1214/12-AOAS536
KEYWORDS: Population size estimation, capture–recapture, Collapsibility, multiple record-systems estimation, missing data, structural zeros
Kanti V. Mardia, Emma M. Petty, Charles C. Taylor
Ann. Appl. Stat. 6 (3), 853-869, (September 2012) DOI: 10.1214/12-AOAS544
KEYWORDS: Electrophoresis, shape, Western Blots
Spencer Hays, Haipeng Shen, Jianhua Z. Huang
Ann. Appl. Stat. 6 (3), 870-894, (September 2012) DOI: 10.1214/12-AOAS551
KEYWORDS: Functional data analysis, expectation maximization algorithm, natural cubic splines, cross-validation, roughness penalty
Art B. Owen, Dean Eckles
Ann. Appl. Stat. 6 (3), 895-927, (September 2012) DOI: 10.1214/12-AOAS547
KEYWORDS: Bayesian pigeonhole bootstrap, online bagging, online bootstrap, relational data, tensor data, unbalanced random effects
Juli Atherton, Nathan Boley, Ben Brown, Nobuo Ogawa, Stuart M. Davidson, Michael B. Eisen, Mark D. Biggin, Peter Bickel
Ann. Appl. Stat. 6 (3), 928-949, (September 2012) DOI: 10.1214/12-AOAS537
KEYWORDS: SELEX, transcription factor binding
Chao Du, S. C. Kou
Ann. Appl. Stat. 6 (3), 950-976, (September 2012) DOI: 10.1214/12-AOAS541
KEYWORDS: Autocorrelation, continuous time Markov chain, fluorescence intensity, Michaelis–Menten model, stochastic network model, single-molecule experiment, turnover time
Antoine Chambaz, Christophe Denis
Ann. Appl. Stat. 6 (3), 977-993, (September 2012) DOI: 10.1214/12-AOAS542
KEYWORDS: Aggregation, ‎classification‎, cross-validation, postural style, targeted minimum loss learning (TMLE), top-scoring pairs classifier, super-learning
Bryony J. Hill, Wilfrid S. Kendall, Elke Thönnes
Ann. Appl. Stat. 6 (3), 994-1020, (September 2012) DOI: 10.1214/12-AOAS553
KEYWORDS: Markov chain Monte Carlo, spatial birth–death process, earthquakes, Empirical Bayes, fibre processes, field of orientations, fingerprints, spatial point processes, tensor fields
Tian Siva Tian, Jianhua Z. Huang, Haipeng Shen, Zhimin Li
Ann. Appl. Stat. 6 (3), 1021-1046, (September 2012) DOI: 10.1214/11-AOAS531
KEYWORDS: inverse problem, MEG, two-way regularization, spatio-temporal
Omkar Muralidharan, Georges Natsoulis, John Bell, Hanlee Ji, Nancy R. Zhang
Ann. Appl. Stat. 6 (3), 1047-1067, (September 2012) DOI: 10.1214/12-AOAS538
KEYWORDS: Empirical Bayes, False discovery rates, discrete data, DNA sequencing, genome variation
Natallia Katenka, Eric D. Kolaczyk
Ann. Appl. Stat. 6 (3), 1068-1094, (September 2012) DOI: 10.1214/12-AOAS550
KEYWORDS: Multi-attribute association networks, gene/protein regulatory networks, Canonical correlation
Seyoung Kim, Eric P. Xing
Ann. Appl. Stat. 6 (3), 1095-1117, (September 2012) DOI: 10.1214/12-AOAS549
KEYWORDS: Lasso, structured sparsity, high-dimensional regression, genetic association mapping, eQTL analysis
Steven P. Lund, Dan Nettleton
Ann. Appl. Stat. 6 (3), 1118-1133, (September 2012) DOI: 10.1214/12-AOAS535
KEYWORDS: differential expression, EM algorithm, hierarchical models, random effects, uncertainty
Shaoyu Li, Yuehua Cui
Ann. Appl. Stat. 6 (3), 1134-1161, (September 2012) DOI: 10.1214/12-AOAS545
KEYWORDS: Allele matching kernel, association study, gene-clustered SNPs, genomic similarity, ‎reproducing kernel Hilbert ‎space, quantitative traits
Yong Wang, Ilze Ziedins, Mark Holmes, Neil Challands
Ann. Appl. Stat. 6 (3), 1162-1184, (September 2012) DOI: 10.1214/12-AOAS548
KEYWORDS: Tree models, change detection, event data, $p$-value adjustment, arson case study
Anastasia Voulgaraki, Benjamin Kedem, Barry I. Graubard
Ann. Appl. Stat. 6 (3), 1185-1208, (September 2012) DOI: 10.1214/12-AOAS552
KEYWORDS: Multivariate density ratio model, ‎kernel‎, random covariates, diagnostic, Nadaraya–Watson, GAM
Chris. J. Oates, Sach Mukherjee
Ann. Appl. Stat. 6 (3), 1209-1235, (September 2012) DOI: 10.1214/11-AOAS532
KEYWORDS: Network inference, biological dynamics, Variable selection
Hai Liu, Shuangge Ma, Richard Kronmal, Kung-Sik Chan
Ann. Appl. Stat. 6 (3), 1236-1255, (September 2012) DOI: 10.1214/11-AOAS534
KEYWORDS: cardiovascular disease, coronary artery calcium, likelihood cross-validation, Model selection, penalized spline, proportional constraint, shrinkage
Ying Hung
Ann. Appl. Stat. 6 (3), 1256-1279, (September 2012) DOI: 10.1214/12-AOAS546
KEYWORDS: consistency, micropipette experiment, order selection, single molecule, threshold autoregressive model
Donghui Yan, Pei Wang, Michael Linden, Beatrice Knudsen, Timothy Randolph
Ann. Appl. Stat. 6 (3), 1280-1305, (September 2012) DOI: 10.1214/12-AOAS543
KEYWORDS: ‎classification‎, ratio of separation, high-dimensional inference, co-training
Yue S. Niu, Heping Zhang
Ann. Appl. Stat. 6 (3), 1306-1326, (September 2012) DOI: 10.1214/12-AOAS539
KEYWORDS: change-point detection, copy number variations, high dimensional data, screening and ranking algorithm
Matthias Kormaksson, James G. Booth, Maria E. Figueroa, Ari Melnick
Ann. Appl. Stat. 6 (3), 1327-1347, (September 2012) DOI: 10.1214/11-AOAS533
KEYWORDS: Integrative model-based clustering, microarray data, Mixture models, EM algorithm, methylation, expression, AML
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