Electronic Journal of Statistics

Visualizing the structure of large trees

Burcu Aydın, Gábor Pataki, Haonan Wang, Alim Ladha, Elizabeth Bullitt, and J.S. Marron

Full-text: Open access

Abstract

This study introduces a new method of visualizing complex tree structured objects. The usefulness of this method is illustrated in the context of detecting unexpected features in a data set of very large trees. The major contribution is a novel two-dimensional graphical representation of each tree, with a covariate coded by color.

The motivating data set contains three dimensional representations of brain artery systems of 105 subjects. Due to inaccuracies inherent in the medical imaging techniques, issues with the reconstruction algorithms and inconsistencies introduced by manual adjustment, various discrepancies are present in the data. The proposed representation enables quick visual detection of the most common discrepancies. For our driving example, this tool led to the modification of 10% of the artery trees and deletion of 6.7%.

The benefits of our cleaning method are demonstrated through a statistical hypothesis test on the effects of aging on vessel structure. The data cleaning resulted in improved significance levels. Our second example analyses brain artery images of healthy patients and patients with brain tumor. Our visualization can identify tumor patients.

Article information

Source
Electron. J. Statist. Volume 5 (2011), 405-420.

Dates
First available in Project Euclid: 10 May 2011

Permanent link to this document
https://projecteuclid.org/euclid.ejs/1305034908

Digital Object Identifier
doi:10.1214/11-EJS612

Mathematical Reviews number (MathSciNet)
MR2802049

Zentralblatt MATH identifier
1274.62049

Subjects
Primary: 62-09: Graphical methods
Secondary: 62-07: Data analysis

Keywords
Visualization data cleaning tree structure descendant-level view brain arteries

Citation

Aydın, Burcu; Pataki, Gábor; Wang, Haonan; Ladha, Alim; Bullitt, Elizabeth; Marron, J.S. Visualizing the structure of large trees. Electron. J. Statist. 5 (2011), 405--420. doi:10.1214/11-EJS612. https://projecteuclid.org/euclid.ejs/1305034908


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References

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