The Annals of Applied Statistics (Project Euclid)

The Annals of Applied Statistics, Volume 2, Number 1 (2008)

Mon, 23 Jun 2008 11:28 EDT

Contents:

Stephen E. Fienberg. Editorial: Statistics and “The lost tomb of Jesus”. 1--2.

Andrey Feuerverger. Statistical analysis of an archeological find. 3--54.

Stephen M. Stigler. Discussion of: Statistical analysis of an archeological find. 55--56.

Camil Fuchs. Discussion of: Statistical analysis of an archeological find. 57--65.

Donald L. Bentley. Discussion of: Statistical analysis of an archaeological find. 66--73.

Sheila M. Bird. Discussion of: Statistical analysis of an archeological find—skeptical counting challenges to an archaeological find. 74--76.

Holger Höfling, Larry Wasserman. Discussion of: Statistical analysis of an archeological find. 77--83.

Randall Ingermanson. Discussion of: Statistical analysis of an archaeological find. 84--90.

J. Mortera, P. Vicard. Discussion of: Statistical analysis of an archeological find. 91--96.

Joseph B. Kadane. Discussion of: Bayesian views of an archaeological find. 97--98.

Andrey Feuerverger. Rejoinder of: Statistical analysis of an archeological find. 99--112.

Lawrence D. Brown. In-season prediction of batting averages: A field test of empirical Bayes and Bayes methodologies. 113--152.

Armin Schwartzman, Robert F. Dougherty, Jonathan E. Taylor. False discovery rate analysis of brain diffusion direction maps. 153--175.

David A. Freedman. On regression adjustments in experiments with several treatments. 176--196.

Bradley Efron. Simultaneous inference: When should hypothesis testing problems be combined?. 197--223.

Tong Tong Wu, Kenneth Lange. Coordinate descent algorithms for lasso penalized regression. 224--244.

Elizaveta Levina, Adam Rothman, Ji Zhu. Sparse estimation of large covariance matrices via a nested Lasso penalty. 245--263.

Charles F. Manski, Francesca Molinari. Skip sequencing: A decision problem in questionnaire design. 264--285.

William T. Barry, Andrew B. Nobel, Fred A. Wright. A statistical framework for testing functional categories in microarray data. 286--315.

Maarten J. L. F. Cruyff, Ulf Böckenholt, Ardo van den Hout, Peter G. M. van der Heijden. Accounting for self-protective responses in randomized response data from a social security survey using the zero-inflated Poisson model. 316--331.

Nancy R. Zhang, Mary C. Wildermuth, Terence P. Speed. Transcription factor binding site prediction with multivariate gene expression data. 332--365.

Tathagata Banerjee, Rahul Mukerjee. Optimal factorial designs for cDNA microarray experiments. 366--385.

Li Qin, Peter B. Gilbert, Dean Follmann, Dongfeng Li. Assessing surrogate endpoints in vaccine trials with case-cohort sampling and the Cox model. 386--407.

Zhi Wei, Hongzhe Li. A hidden spatial-temporal Markov random field model for network-based analysis of time course gene expression data. 408--429.

John E. Fiorentino. Letter to the Editor. 430--431.

Clifford Spiegelman, S. J. Sheather, W. A. Tobin, W. D. James, S. Wexler, D. M. Roundhill. Response to the Letter to the Editor. 432--433.

The Annals of Applied Statistics, Volume 2, Number 2 (2008)

Thu, 03 Jul 2008 16:57 EDT

Contents:

Ann B. Lee, Boaz Nadler, Larry Wasserman. Treelets—An adaptive multi-scale basis for sparse unordered data. 435--471.

Fionn Murtagh. Discussion of: Treelets—An adaptive multi-scale basis for sparse unordered data. 472--473.

Peter J. Bickel, Ya’acov Ritov. Discussion of: Treelets—An adaptive multi-scale basis for sparse unordered data. 474--477.

Nicolai Meinshausen, Peter Bühlmann. Discussion of: Treelets—An adaptive multi-scale basis for sparse unordered data. 478--481.

Robert Tibshirani. Discussion of: Treelets—An adaptive multi-scale basis for sparse unordered data. 482--483.

Xing Qiu. Discussion of: Treelets—An adaptive multi-scale basis for sparse unordered data. 484--488.

Catherine Tuglus, Mark J. van der Laan. Discussion of: Treelets—An adaptive multi-scale basis for sparse unordered data. 489--493.

Ann B. Lee, Boaz Nadler, Larry Wasserman. Rejoinder of: Treelets—An adaptive multi-scale basis for spare unordered data. 494--500.

S. C. Kou. Stochastic modeling in nanoscale biophysics: Subdiffusion within proteins. 501--535.

Andrew Gelman, Cexun Jeffrey Cai. Should the Democrats move to the left on economic policy?. 536--549.

Philip B. Stark. Conservative statistical post-election audits. 550--581.

Lu Zheng, Marvin Zelen. Multi-center clinical trials: Randomization and ancillary statistics. 582--600.

Haipeng Shen, Jianhua Z. Huang. Forecasting time series of inhomogeneous Poisson processes with application to call center workforce management. 601--623.

T. A. Buishand, L. de Haan, C. Zhou. On spatial extremes: With application to a rainfall problem. 624--642.

Holger Höfling, Robert Tibshirani. A study of pre-validation. 643--664.

Qingzhao Yu, Elizabeth A. Stasny, Bin Li. Bayesian models to adjust for response bias in survey data for estimating rape and domestic violence rates from the NCVS. 665--686.

Robert B. Scharpf, Giovanni Parmigiani, Jonathan Pevsner, Ingo Ruczinski. Hidden Markov models for the assessment of chromosomal alterations using high-throughput SNP arrays. 687--713.

Egil Ferkingstad, Arnoldo Frigessi, Håvard Rue, Gudmar Thorleifsson, Augustine Kong. Unsupervised empirical Bayesian multiple testing with external covariates. 714--735.

Xiaoxi Zhang, Timothy D. Johnson, Roderick J. A. Little, Yue Cao. Quantitative magnetic resonance image analysis via the EM algorithm with stochastic variation. 736--755.

Sergio Venturini, Francesca Dominici, Giovanni Parmigiani. Gamma shape mixtures for heavy-tailed distributions. 756--776.

The Annals of Applied Statistics, Volume 2, Number 3 (2008)

Mon, 13 Oct 2008 10:27 EDT

Contents:

Persi Diaconis, Sharad Goel, Susan Holmes. Horseshoes in multidimensional scaling and local kernel methods. 777--807.

Donald B. Rubin. For objective causal inference, design trumps analysis. 808--840.

Hemant Ishwaran, Udaya B. Kogalur, Eugene H. Blackstone, Michael S. Lauer. Random survival forests. 841--860.

P. L. Davies, U. Gather, M. Meise, D. Mergel, T. Mildenberger. Residual-based localization and quantification of peaks in X-ray diffractograms. 861--886.

Louis Lyons. Open statistical issues in Particle Physics. 887--915.

Jerome H. Friedman, Bogdan E. Popescu. Predictive learning via rule ensembles. 916--954.

L. Fraser Jackson, Alistair G. Gray, Stephen E. Fienberg. Sequential category aggregation and partitioning approaches for multi-way contingency tables based on survey and census data. 955--981.

Philip B. Stark. A sharper discrepancy measure for post-election audits. 982--985.

Daniela M. Witten, Robert Tibshirani. Testing significance of features by lassoed principal components. 986--1012.

Mary C. Meyer. Inference using shape-restricted regression splines. 1013--1033.

Beth Ann Griffin, Daniel F. McCaffrey, Andrew R. Morral. An application of principal stratification to control for institutionalization at follow-up in studies of substance abuse treatment programs. 1034--1055.

Jie Peng, Hans-Georg Müller. Distance-based clustering of sparsely observed stochastic processes, with applications to online auctions. 1056--1077.

Cécile Ané. Analysis of comparative data with hierarchical autocorrelation. 1078--1102.

Steven D. Mark. A general formulation for standardization of rates as a method to control confounding by measured and unmeasured disease risk factors. 1103--1122.

D. Commenges, A. Sayyareh, L. Letenneur, J. Guedj, A. Bar-Hen. Estimating a difference of Kullback–Leibler risks using a normalized difference of AIC. 1123--1142.

The Annals of Applied Statistics, Volume 2, Number 4 (2008)

Thu, 08 Jan 2009 09:17 EST

Contents:

Montserrat Fuentes, Peter Guttorp, Michael L. Stein. Special section on statistics in the atmospheric sciences. 1143--1147.

Montserrat Fuentes, Brian Reich, Gyuwon Lee. Spatial–temporal mesoscale modeling of rainfall intensity using gage and radar data. 1148--1169.

Veronica J. Berrocal, Adrian E. Raftery, Tilmann Gneiting. Probabilistic quantitative precipitation field forecasting using a two-stage spatial model. 1170--1193.

Huiyan Sang, Alan E. Gelfand, Chris Lennard, Gabriele Hegerl, Bruce Hewitson. Interpreting self-organizing maps through space–time data models. 1194--1216.

Dorin Drignei, Chris E. Forest, Doug Nychka. Parameter estimation for computationally intensive nonlinear regression with an application to climate modeling. 1217--1230.

Anders Malmberg, Avelino Arellano, David P. Edwards, Natasha Flyer, Doug Nychka, Christopher Wikle. Interpolating fields of carbon monoxide data using a hybrid statistical-physical model. 1231--1248.

Gavin Shaddick, Duncan Lee, James V. Zidek, Ruth Salway. Estimating exposure response functions using ambient pollution concentrations. 1249--1270.

Mikyoung Jun, Michael L. Stein. Nonstationary covariance models for global data. 1271--1289.

Hui Zou, Ji Zhu, Trevor Hastie. New multicategory boosting algorithms based on multicategory Fisher-consistent losses. 1290--1306.

Qing Zhou, Wing Hung Wong. Reconstructing the energy landscape of a distribution from Monte Carlo samples. 1307--1331.

Armin Schwartzman. Empirical null and false discovery rate inference for exponential families. 1332--1359.

Andrew Gelman, Aleks Jakulin, Maria Grazia Pittau, Yu-Sung Su. A weakly informative default prior distribution for logistic and other regression models. 1360--1383.

Yangxin Huang, Tao Lu. Modeling long-term longitudinal HIV dynamics with application to an AIDS clinical study. 1384--1408.

Yang Yang, Peter Gilbert, Ira M. Longini, Jr., M. Elizabeth Halloran. A Bayesian framework for estimating vaccine efficacy per infectious contact. 1409--1431.

Li Qin, Yuedong Wang. Nonparametric spectral analysis with applications to seizure characterization using EEG time series. 1432--1451.

Isobel Claire Gormley, Thomas Brendan Murphy. A mixture of experts model for rank data with applications in election studies. 1452--1477.

Paul Gustafson, Geneviève Lefebvre. Bayesian multinomial regression with class-specific predictor selection. 1478--1502.

Hsieh Fushing, Li Zhu, David I. Shapiro-Ilan, James F. Campbell, Edwin E. Lewis. State-space based mass event-history model I: Many decision-making agents with one target. 1503--1522.

Tommaso Proietti, Alessandra Luati. Real time estimation in local polynomial regression, with application to trend-cycle analysis. 1523--1553.

Claire Cannamela, Josselin Garnier, Bertrand Iooss. Controlled stratification for quantile estimation. 1554--1580.

The Annals of Applied Statistics, Volume 3, Number 1 (2009)

Thu, 16 Apr 2009 09:27 EDT

Contents:

Thomas J. Loredo, John Rice, Michael L. Stein. Introduction to papers on astrostatistics. 1--5.

Sarah Bridle, John Shawe-Taylor, Adam Amara, Douglas Applegate, Sreekumar T. Balan, Joel Berge, Gary Bernstein, Hakon Dahle, Thomas Erben, Mandeep Gill, Alan Heavens, Catherine Heymans, F. William High, Henk Hoekstra, Mike Jarvis, Donnacha Kirk, Thomas Kitching, Jean-Paul Kneib, Konrad Kuijken, David Lagatutta, Rachel Mandelbaum, Richard Massey, Yannick Mellier, Baback Moghaddam, Yassir Moudden, Reiko Nakajima, Stephane Paulin-Henriksson, Sandrine Pires, Anais Rassat, Alexandre Refregier, Jason Rhodes, Tim Schrabback, Elisabetta Semboloni, Marina Shmakova, Ludovic van Waerbeke, Dugan Witherick, Lisa Voigt, David Wittman. Handbook for the GREAT08 Challenge: An image analysis competition for cosmological lensing. 6--37.

Nicolai Meinshausen, Peter Bickel, John Rice. Efficient blind search: Optimal power of detection under computational cost constraints. 38--60.

Paolo Cabella, Domenico Marinucci. Statistical challenges in the analysis of Cosmic Microwave Background radiation. 61--95.

Bodhisattva Sen, Moulinath Banerjee, Michael Woodroofe, Mario Mateo, Matthew Walker. Streaming motion in Leo I. 96--116.

David A. van Dyk, Steven DeGennaro, Nathan Stein, William H. Jefferys, Ted von Hippel. Statistical analysis of stellar evolution. 117--143.

Christopher Genovese, Peter Freeman, Larry Wasserman, Robert Nichol, Christopher Miller. Inference for the dark energy equation of state using Type IA supernova data. 144--178.

Yoav Benjamini, Yulia Gavrilov. A simple forward selection procedure based on false discovery rate control. 179--198.

Murray Aitkin, Charles C. Liu, Tom Chadwick. Bayesian model comparison and model averaging for small-area estimation. 199--221.

Ruiyan Luo, Bret Larget. Modeling substitution and indel processes for AFLP marker evolution and phylogenetic inference. 222--248.

Philippe Huber, Olivier Scaillet, Maria-Pia Victoria-Feser. Assessing multivariate predictors of financial market movements: A latent factor framework for ordinal data. 249--271.

Michael L. Stein. Spatial interpolation of high-frequency monitoring data. 272--291.

Mark Culp, George Michailidis, Kjell Johnson. On multi-view learning with additive models. 292--318.

Carles Bretó, Daihai He, Edward L. Ionides, Aaron A. King. Time series analysis via mechanistic models. 319--348.

Snigdhansu Chatterjee, Peihua Qiu. Distribution-free cumulative sum control charts using bootstrap-based control limits. 349--369.

Christopher J. Paciorek, Jeff D. Yanosky, Robin C. Puett, Francine Laden, Helen H. Suh. Practical large-scale spatio-temporal modeling of particulate matter concentrations. 370--397.

Abhyuday Mandal, Pritam Ranjan, C. F. Jeff Wu. $\bolds{\mathcal{G}}$ -SELC: Optimization by sequential elimination of level combinations using genetic algorithms and Gaussian processes. 398--421.

Yacine Aït-Sahalia, Jialin Yu. High frequency market microstructure noise estimates and liquidity measures. 422--457.

Chong-Zhi Di, Ciprian M. Crainiceanu, Brian S. Caffo, Naresh M. Punjabi. Multilevel functional principal component analysis. 458--488.

Donald B. Macnaughton. Letter to the Editor. 489--489.

The Annals of Applied Statistics, Volume 3, Number 2 (2009)

Mon, 22 Jun 2009 09:10 EDT

Contents:

Shane T. Jensen, Kenneth E. Shirley, Abraham J. Wyner. Bayesball: A Bayesian hierarchical model for evaluating fielding in major league baseball. 491--520.

Jianqing Fan, Yang Feng, Yichao Wu. Network exploration via the adaptive LASSO and SCAD penalties. 521--541.

Jorge R. Busch, Pablo A. Ferrari, Ana Georgina Flesia, Ricardo Fraiman, Sebastian P. Grynberg, Florencia Leonardi. Testing statistical hypothesis on random trees and applications to the protein classification problem. 542--563.

Art B. Owen, Patrick O. Perry. Bi-cross-validation of the SVD and the nonnegative matrix factorization. 564--594.

Dankmar Böhning, Peter G. M. van der Heijden. A covariate adjustment for zero-truncated approaches to estimating the size of hidden and elusive populations. 595--610.

Francesco Bartolucci, Monia Lupparelli, Giorgio E. Montanari. Latent Markov model for longitudinal binary data: An application to the performance evaluation of nursing homes. 611--636.

Céline Lévy-Leduc, François Roueff. Detection and localization of change-points in high-dimensional network traffic data. 637--662.

D. Fouskakis, I. Ntzoufras, D. Draper. Bayesian variable selection using cost-adjusted BIC, with application to cost-effective measurement of quality of health care. 663--690.

Brenda Jenney, Sharon Lohr. Experimental designs for multiple-level responses, with application to a large-scale educational intervention. 691--709.

Xi Kathy Zhou, Merlise A. Clyde, James Garrett, Viridiana Lourdes, Michael O’Connell, Giovanni Parmigiani, David J. Turner, Tim Wiles. Statistical methods for automated drug susceptibility testing: Bayesian minimum inhibitory concentration prediction from growth curves. 710--730.

Peter J. Green, Julia Mortera. Sensitivity of inferences in forensic genetics to assumptions about founding genes. 731--763.

Paul T. Edlefsen, Chuanhai Liu, Arthur P. Dempster. Estimating limits from Poisson counting data using Dempster–Shafer analysis. 764--790.

Kyung-Ah Sohn, Eric P. Xing. A hierarchical Dirichlet process mixture model for haplotype reconstruction from multi-population data. 791--821.

Ryan J. Tibshirani, Robert Tibshirani. A bias correction for the minimum error rate in cross-validation. 822--829.

Brisa N. Sánchez, Esben Budtz-Jørgensen, Louise M. Ryan. An estimating equations approach to fitting latent exposure models with longitudinal health outcomes. 830--856.

Yili Hong, William Q. Meeker, James D. McCalley. Prediction of remaining life of power transformers based on left truncated and right censored lifetime data. 857--879.

The Annals of Applied Statistics, Volume 3, Number 3 (2009)

Mon, 05 Oct 2009 16:09 EDT

Contents:

Dylan S. Small, Paul R. Rosenbaum. Error-free milestones in error prone measurements. 881--901.

E. Anderes, B. Yu, V. Jovanovic, C. Moroney, M. Garay, A. Braverman, E. Clothiaux. Maximum likelihood estimation of cloud height from multi-angle satellite imagery. 902--921.

Bradley Efron. Are a set of microarrays independent of each other?. 922--942.

Shengde Liang, Bradley P. Carlin, Alan E. Gelfand. Analysis of Minnesota colon and rectum cancer point patterns with spatial and nonspatial covariate information. 943--962.

Ming Yuan. State price density estimation via nonparametric mixtures. 963--984.

Andrey A. Shabalin, Victor J. Weigman, Charles M. Perou, Andrew B. Nobel. Finding large average submatrices in high dimensional data. 985--1012.

Peihua Qiu, Rong Yang, Michael Potegal. Statistical modeling of the time course of tantrum anger. 1013--1034.

David Rossell. GaGa: A parsimonious and flexible model for differential expression analysis. 1035--1051.

Andrew O. Finley, Sudipto Banerjee, Ronald E. McRoberts. Hierarchical spatial models for predicting tree species assemblages across large domains. 1052--1079.

Shane T. Jensen, Ibrahim Erkan, Erna S. Arnardottir, Dylan S. Small. Bayesian testing of many hypotheses × many genes: A study of sleep apnea. 1080--1101.

Ian L. Dryden, Alexey Koloydenko, Diwei Zhou. Non-Euclidean statistics for covariance matrices, with applications to diffusion tensor imaging. 1102--1123.

Sungduk Kim, Yingmei Xi, Ming-Hui Chen. A new latent cure rate marker model for survival data. 1124--1146.

Erkan Ozge Buzbas, Paul Joyce. Maximum likelihood estimates under k -allele models with selection can be numerically unstable. 1147--1162.

Elizabeth R. Brown. Assessing the association between trends in a biomarker and risk of event with an application in pediatric HIV/AIDS. 1163--1182.

W. Evan Johnson, X. Shirley Liu, Jun S. Liu. Doubly stochastic continuous-time hidden Markov approach for analyzing genome tiling arrays. 1183--1203.

Asger Hobolth, Eric A. Stone. Simulation from endpoint-conditioned, continuous-time Markov chains on a finite state space, with applications to molecular evolution. 1204--1231.

The Annals of Applied Statistics, Volume 3, Number 4 (2009)

Mon, 01 Mar 2010 09:33 EST

Contents:

Michael A. Newton. Introducing the discussion paper by Székely and Rizzo. 1233--1235.

Gábor J. Székely, Maria L. Rizzo. Brownian distance covariance. 1236--1265.

Peter J. Bickel, Ying Xu. Discussion of: Brownian distance covariance. 1266--1269.

Michael R. Kosorok. Discussion of: Brownian distance covariance. 1270--1278.

Leslie Cope. Discussion of: Brownian distance covariance. 1279--1281.

Andrey Feuerverger. Discussion of: Brownian distance covariance. 1282--1284.

Arthur Gretton, Kenji Fukumizu, Bharath K. Sriperumbudur. Discussion of: Brownian distance covariance. 1285--1294.

Bruno Rémillard. Discussion of: Brownian distance covariance. 1295--1298.

Christopher R. Genovese. Discussion of: Brownian distance covariance. 1299--1302.

Gábor J. Székely, Maria L. Rizzo. Rejoinder: Brownian distance covariance. 1303--1308.

Keith A. Baggerly, Kevin R. Coombes. Deriving chemosensitivity from cell lines: Forensic bioinformatics and reproducible research in high-throughput biology. 1309--1334.

Herman Chernoff, Shaw-Hwa Lo, Tian Zheng. Discovering influential variables: A method of partitions. 1335--1369.

Edward Mulrow, Hee-Choon Shin, Fritz Scheuren. Assessing uncertainty in the American Indian Trust Fund. 1370--1381.

Yingchun Zhou, Nell Sedransk. Functional data analytic approach of modeling ECG T-wave shape to measure cardiovascular behavior. 1382--1402.

Sivan Aldor-Noiman, Paul D. Feigin, Avishai Mandelbaum. Workload forecasting for a call center: Methodology and a case study. 1403--1447.

Sarat C. Dass, Mingfei Li. Hierarchical mixture models for assessing fingerprint individuality. 1448--1466.

Josue G. Martinez, Jianhua Z. Huang, Robert C. Burghardt, Rola Barhoumi, Raymond J. Carroll. Use of multiple singular value decompositions to analyze complex intracellular calcium ion signals. 1467--1492.

Tucker McElroy. Incompatibility of trends in multi-year estimates from the American Community Survey. 1493--1504.

Jan van den Broek, Hiroshi Nishiura. Using epidemic prevalence data to jointly estimate reproduction and removal. 1505--1520.

David A. Orlando, Edwin S. Iversen Jr., Alexander J. Hartemink, Steven B. Haase. A branching process model for flow cytometry and budding index measurements in cell synchrony experiments. 1521--1541.

Li-Chu Chien, I-Shou Chang, Shih Sheng Jiang, Pramod K. Gupta, Chi-Chung Wen, Yuh-Jenn Wu, Chao A. Hsiung. Profiling time course expression of virus genes—an illustration of Bayesian inference under shape restrictions. 1542--1565.

Michiel Debruyne. An outlier map for Support Vector Machine classification. 1566--1580.

Nozer D. Singpurwalla. The utility of reliability and survival. 1581--1596.

Burcu Aydın, Gábor Pataki, Haonan Wang, Elizabeth Bullitt, J. S. Marron. A principal component analysis for trees. 1597--1615.

Iain M. Johnstone. Approximate null distribution of the largest root in multivariate analysis. 1616--1633.

Xingdong Feng, Xuming He. Inference on low-rank data matrices with applications to microarray data. 1634--1654.

James G. Scott. Nonparametric Bayesian multiple testing for longitudinal performance stratification. 1655--1674.

Daniel Merl, Julia Ling-Yu Chen, Jen-Tsan Chi, Mike West. An integrative analysis of cancer gene expression studies using Bayesian latent factor modeling. 1675--1694.

Youyi Fong, Peter Guttorp, Janis Abkowitz. Bayesian inference and model choice in a hidden stochastic two-compartment model of hematopoietic stem cell fate decisions. 1695--1709.

Wei-Yin Loh. Improving the precision of classification trees. 1710--1737.

Ming Yuan, V. Roshan Joseph, Hui Zou. Structured variable selection and estimation. 1738--1757.

Daniel Gervini. Detecting and handling outlying trajectories in irregularly sampled functional datasets. 1758--1775.

Fabio Rigat, Jim Q. Smith. Semi-parametric dynamic time series modelling with applications to detecting neural dynamics. 1776--1804.

Yufen Zhang, James S. Hodges, Sudipto Banerjee. Smoothed ANOVA with spatial effects as a competitor to MCAR in multivariate spatial smoothing. 1805--1830.

The Annals of Applied Statistics, Volume 4, Number 1 (2010)

Tue, 11 May 2010 09:28 EDT

Contents:

Stephen E. Fienberg. Introduction to papers on the modeling and analysis of network data. 1--4.

Mark S. Handcock, Krista J. Gile. Modeling social networks from sampled data. 5--25.

Cheolwoo Park, Felix Hernández-Campos, J. S. Marron, Kevin Jeffay, F. Donelson Smith. Analysis of dependence among size, rate and duration in internet flows. 26--52.

Jie Peng, Ji Zhu, Anna Bergamaschi, Wonshik Han, Dong-Young Noh, Jonathan R. Pollack, Pei Wang. Regularized multivariate regression for identifying master predictors with application to integrative genomics study of breast cancer. 53--77.

Harsh Singhal, George Michailidis. Optimal experiment design in a filtering context with application to sampled network data. 78--93.

Mladen Kolar, Le Song, Amr Ahmed, Eric P. Xing. Estimating time-varying networks. 94--123.

Jonathan Chang, David M. Blei. Hierarchical relational models for document networks. 124--150.

Wolfgang Jank, Inbal Yahav. E-loyalty networks in online auctions. 151--178.

Ann B. Lee, Diana Luca, Kathryn Roeder. A spectral graph approach to discovering genetic ancestry. 179--202.

Mária Süveges, Anthony C. Davison. Model misspecification in peaks over threshold analysis. 203--221.

Bhojnarine R. Rambharat, Anthony E. Brockwell. Sequential Monte Carlo pricing of American-style options under stochastic volatility models. 222--265.

Hugh A. Chipman, Edward I. George, Robert E. McCulloch. BART: Bayesian additive regression trees. 266--298.

QiQi Lu, Robert Lund, Thomas C. M. Lee. An MDL approach to the climate segmentation problem. 299--319.

Elias Chaibub Neto, Mark P. Keller, Alan D. Attie, Brian S. Yandell. Causal graphical models in systems genetics: A unified framework for joint inference of causal network and genetic architecture for correlated phenotypes. 320--339.

Tian Siva Tian, Gareth M. James, Rand R. Wilcox. A multivariate adaptive stochastic search method for dimensionality reduction in classification. 340--365.

Kenneth E. Shirley, Dylan S. Small, Kevin G. Lynch, Stephen A. Maisto, David W. Oslin. Hidden Markov models for alcoholism treatment trial data. 366--395.

Thomas Brendan Murphy, Nema Dean, Adrian E. Raftery. Variable selection and updating in model-based discriminant analysis for high dimensional data with food authenticity applications. 396--421.

Omkar Muralidharan. An empirical Bayes mixture method for effect size and false discovery rate estimation. 422--438.

Brian J. Reich, Dipankar Bandyopadhyay. A latent factor model for spatial data with informative missingness. 439--459.

Hua Liang, Hongyu Miao, Hulin Wu. Estimation of constant and time-varying dynamic parameters of HIV infection in a nonlinear differential equation model. 460--483.

Elizabeth C. Mannshardt-Shamseldin, Richard L. Smith, Stephan R. Sain, Linda O. Mearns, Daniel Cooley. Downscaling extremes: A comparison of extreme value distributions in point-source and gridded precipitation data. 484--502.

Miika Ahdesmäki, Korbinian Strimmer. Feature selection in omics prediction problems using cat scores and false nondiscovery rate control. 503--519.

Rui Wang, Lu Tian, Tianxi Cai, L. J. Wei. Nonparametric inference procedure for percentiles of the random effects distribution in meta-analysis. 520--532.

The Annals of Applied Statistics, Volume 4, Number 2 (2010)

Tue, 03 Aug 2010 09:30 EDT

Contents:

Stephen E. Fienberg. Introduction to papers on the modeling and analysis of network data—II. 533--534.

Eric P. Xing, Wenjie Fu, Le Song. A state-space mixed membership blockmodel for dynamic network tomography. 535--566.

Tom A. B. Snijders, Johan Koskinen, Michael Schweinberger. Maximum likelihood estimation for social network dynamics. 567--588.

Ya Xu, Justin S. Dyer, Art B. Owen. Empirical stationary correlations for semi-supervised learning on graphs. 589--614.

Ricardo Silva, Katherine Heller, Zoubin Ghahramani, Edoardo M. Airoldi. Ranking relations using analogies in biological and information networks. 615--644.

Nicholas A. Heard, David J. Weston, Kiriaki Platanioti, David J. Hand. Bayesian anomaly detection methods for social networks. 645--662.

Gareth M. James, Chiara Sabatti, Nengfeng Zhou, Ji Zhu. Sparse regulatory networks. 663--686.

Hugo Zanghi, Franck Picard, Vincent Miele, Christophe Ambroise. Strategies for online inference of model-based clustering in large and growing networks. 687--714.

Mahendra Mariadassou, Stéphane Robin, Corinne Vacher. Uncovering latent structure in valued graphs: A variational approach. 715--742.

Anat Sakov, Ilan Golani, Dina Lipkind, Yoav Benjamini. High-throughput data analysis in behavior genetics. 743--763.

Genevera I. Allen, Robert Tibshirani. Transposable regularized covariance models with an application to missing data imputation. 764--790.

Michael R. Huber, Rodney X. Sturdivant. Building a model for scoring 20 or more runs in a baseball game. 791--804.

Dipankar Bandyopadhyay, Debajyoti Sinha, Stuart Lipsitz, Elizabeth Letourneau. Changing approaches of prosecutors towards juvenile repeated sex-offenders: A Bayesian evaluation. 805--829.

John Hughes, John Fricks, William Hancock. Likelihood inference for particle location in fluorescence microscopy. 830--848.

Carrie A. Hosman, Ben B. Hansen, Paul W. Holland. The sensitivity of linear regression coefficients’ confidence limits to the omission of a confounder. 849--870.

Audrey Qiuyan Fu, Diane P. Genereux, Reinhard Stöger, Charles D. Laird, Matthew Stephens. Statistical inference of transmission fidelity of DNA methylation patterns over somatic cell divisions in mammals. 871--892.

Woncheol Jang, Ji Meng Loh. Density estimation for grouped data with application to line transect sampling. 893--915.

Kristin P. Lennox, David B. Dahl, Marina Vannucci, Ryan Day, Jerry W. Tsai. A Dirichlet process mixture of hidden Markov models for protein structure prediction. 916--942.

Kimberly F. Sellers, Galit Shmueli. A flexible regression model for count data. 943--961.

Qunhua Li, Michael J. MacCoss, Matthew Stephens. A nested mixture model for protein identification using mass spectrometry. 962--987.

Xiaodan Fan, Saumyadipta Pyne, Jun S. Liu. Bayesian meta-analysis for identifying periodically expressed genes in fission yeast cell cycle. 988--1013.

Wei Sun, Fred A. Wright. A geometric interpretation of the permutation p -value and its application in eQTL studies. 1014--1033.

Maria L. Rizzo, Gábor J. Székely. DISCO analysis: A nonparametric extension of analysis of variance. 1034--1055.

Martin Slawski, Wolfgang zu Castell, Gerhard Tutz. Feature selection guided by structural information. 1056--1080.

Stergios B. Fotopoulos, Venkata K. Jandhyala, Elena Khapalova. Exact asymptotic distribution of change-point mle for change in the mean of Gaussian sequences. 1081--1104.

Jan van den Brakel, Joeri Roels. Intervention analysis with state-space models to estimate discontinuities due to a survey redesign. 1105--1138.

The Annals of Applied Statistics, Volume 4, Number 3 (2010)

Mon, 18 Oct 2010 09:44 EDT

Contents:

George Woodworth, Joseph Kadane. Age- and time-varying proportional hazards models for employment discrimination. 1139--1157.

Xiaoquan Wen, Matthew Stephens. Using linear predictors to impute allele frequencies from summary or pooled genotype data. 1158--1182.

Yiping Dou, Nhu D. Le, James V. Zidek. Modeling hourly ozone concentration fields. 1183--1213.

Gengxin Li, Yuehua Cui. A general statistical framework for dissecting parent-of-origin effects underlying endosperm traits in flowering plants. 1214--1233.

Brian Kriegler, Richard Berk. Small area estimation of the homeless in Los Angeles: An application of cost-sensitive stochastic gradient boosting. 1234--1255.

Siddhartha R. Dalal, Bing Han. Detection of radioactive material entering national ports: A Bayesian approach to radiation portal data. 1256--1271.

James M. Kilner, Karl J. Friston. Topological inference for EEG and MEG. 1272--1290.

Natalie Shlomo, Chris Skinner. Assessing the protection provided by misclassification-based disclosure limitation methods for survey microdata. 1291--1310.

Ada Lau, Patrick McSharry. Approaches for multi-step density forecasts with application to aggregated wind power. 1311--1341.

Melanie A. Wilson, Edwin S. Iversen, Merlise A. Clyde, Scott C. Schmidler, Joellen M. Schildkraut. Bayesian model search and multilevel inference for SNP association studies. 1342--1364.

Kingshuk Roy Choudhury, Limian Zheng, John J. Mackrill. Analysis of spatial distribution of marker expression in cells using boundary distance plots. 1365--1382.

David I. Warton, Leah C. Shepherd. Poisson point process models solve the “pseudo-absence problem” for presence-only data in ecology. 1383--1402.

Avishek Chakraborty, Alan E. Gelfand, Adam M. Wilson, Andrew M. Latimer, John A. Silander, Jr.. Modeling large scale species abundance with latent spatial processes. 1403--1429.

Holger Dette, Andrey Pepelyshev, Tim Holland-Letz. Optimal designs for random effect models with correlated errors with applications in population pharmacokinetics. 1430--1450.

Yijie Zhou, Francesca Dominici, Thomas A. Louis. A smoothing approach for masking spatial data. 1451--1475.

Andrea S. Foulkes, Livio Azzoni, Xiaohong Li, Margaret A. Johnson, Colette Smith, Karam Mounzer, Luis J. Montaner. Prediction-based classification for longitudinal biomarkers. 1476--1497.

Caiyan Li, Hongzhe Li. Variable selection and regression analysis for graph-structured covariates with an application to genomics. 1498--1516.

Paul S. Albert, Joanna H. Shih. An approach for jointly modeling multivariate longitudinal measurements and discrete time-to-event data. 1517--1532.

Pepa Ramirez-Cobo, Rosa E. Lillo, Simon Wilson, Michael P. Wiper. Bayesian inference for double Pareto lognormal queues. 1533--1557.

J. L. Wadsworth, J. A. Tawn, P. Jonathan. Accounting for choice of measurement scale in extreme value modeling. 1558--1578.

Seokho Lee, Jianhua Z. Huang, Jianhua Hu. Sparse logistic principal components analysis for binary data. 1579--1601.

Kwun Chuen Gary Chan, Mei-Cheng Wang. Backward estimation of stochastic processes with failure events as time origins. 1602--1620.

The Annals of Applied Statistics, Volume 4, Number 4 (2010)

Tue, 04 Jan 2011 14:04 EST

Contents:

Adele Cutler. Remembering Leo Breiman. 1621--1633.

Peter J. Bickel. Leo Breiman: An important intellectual and personal force in statistics, my life and that of many others. 1634--1637.

Peter Bühlmann. Remembrance of Leo Breiman. 1638--1641.

Michael I. Jordan. Leo Breiman. 1642--1643.

Richard A. Olshen. Remembering Leo Breiman. 1644--1648.

Jerome H. Friedman. Remembering Leo. 1649--1651.

Charles J. Stone. Selected recollections of my relationship with Leo Breiman. 1652--1655.

Jacob Feldman. Leo and me. 1656--1656.

Bin Yu. Remembering Leo. 1657--1659.

Peter J. Bickel, Nathan Boley, James B. Brown, Haiyan Huang, Nancy R. Zhang. Subsampling methods for genomic inference. 1660--1697.

Tong Tong Wu, Kenneth Lange. Multicategory vertex discriminant analysis for high-dimensional data. 1698--1721.

Jennifer A. Tom, Janet S. Sinsheimer, Marc A. Suchard. Reuse, recycle, reweigh: Combating influenza through efficient sequential Bayesian computation for massive data. 1722--1748.

Zhongyang Zhang, Kenneth Lange, Roel Ophoff, Chiara Sabatti. Reconstructing DNA copy number by penalized estimation and imputation. 1749--1773.

D. James Greiner, Kevin M. Quinn. Exit polling and racial bloc voting: Combining individual-level and R×C ecological data. 1774--1796.

Yuliya V. Karpievitch, Ashoka D. Polpitiya, Gordon A. Anderson, Richard D. Smith, Alan R. Dabney. Liquid chromatography mass spectrometry-based proteomics: Biological and technological aspects. 1797--1823.

Dominique-Laurent Couturier, Maria-Pia Victoria-Feser. Zero-inflated truncated generalized Pareto distribution for the analysis of radio audience data. 1824--1846.

J. Drylewicz, J. Guedj, D. Commenges, R. Thiébaut. Modeling the dynamics of biomarkers during primary HIV infection taking into account the uncertainty of infection date. 1847--1870.

Nicolai Bissantz, Hajo Holzmann, Mirosław Pawlak. Improving PSF calibration in confocal microscopic imaging—estimating and exploiting bilateral symmetry. 1871--1891.

Mohammed Haddou, Louis-Paul Rivest, Michael Pierrynowski. A nonlinear mixed effects directional model for the estimation of the rotation axes of the human ankle. 1892--1912.

Tingting Zhang, S. C. Kou. Nonparametric inference of doubly stochastic Poisson process data via the kernel method. 1913--1941.

Veronica J. Berrocal, Alan E. Gelfand, David M. Holland. A bivariate space–time downscaler under space and time misalignment. 1942--1975.

Samiran Ghosh. An imputation-based approach for parameter estimation in the presence of ambiguous censoring with application in industrial supply chain. 1976--1999.

Xia Wang, Dipak K. Dey. Generalized extreme value regression for binary response data: An application to B2B electronic payments system adoption. 2000--2023.

Francesco C. Stingo, Yian A. Chen, Marina Vannucci, Marianne Barrier, Philip E. Mirkes. A Bayesian graphical modeling approach to microRNA regulatory network inference. 2024--2048.

Nicolai Meinshausen. Node harvest. 2049--2072.

Luciano I. de Castro, Harry J. Paarsch. Testing affiliation in private-values models of first-price auctions using grid distributions. 2073--2098.

Adam A. Szpiro, Kenneth M. Rice, Thomas Lumley. Model-robust regression and a Bayesian “sandwich” estimator. 2099--2113.

Xuming He, Ya-Hui Hsu, Mingxiu Hu. Detection of treatment effects by covariate-adjusted expected shortfall. 2114--2125.

Alejandro Jara, Emmanuel Lesaffre, Maria De Iorio, Fernando Quintana. Bayesian semiparametric inference for multivariate doubly-interval-censored data. 2126--2149.

Jan Gertheiss, Gerhard Tutz. Sparse modeling of categorial explanatory variables. 2150--2180.

Brian Francis, Regina Dittrich, Reinhold Hatzinger. Modeling heterogeneity in ranked responses by nonparametric maximum likelihood: How do Europeans get their scientific knowledge?. 2181--2202.

David I. Warton, Leah C. Shepherd. Correction note: Poisson point process models solve the “pseudo-absence problem” for presence-only data in ecology. 2203--2204.

Ada Lau, Patrick McSharry. Correction note: Approaches for multi-step density forecasts with application to aggregated wind power. 2205--2205.

The Annals of Applied Statistics, Volume 5, Number 1 (2011)

Mon, 21 Mar 2011 09:49 EDT

Contents:

Michael L. Stein. Editorial. 1--4.

Blakeley B. McShane, Abraham J. Wyner. A statistical analysis of multiple temperature proxies: Are reconstructions of surface temperatures over the last 1000 years reliable?. 5--44.

L. Mark Berliner. Discussion of: A statistical analysis of multiple temperature proxies: Are reconstructions of surface temperatures over the last 1000 years reliable?. 45--46.

Alexey Kaplan. Discussion of: A statistical analysis of multiple temperature proxies: Are reconstructions of surface temperatures over the last 1000 years reliable?. 47--51.

Richard A. Davis, Jingchen Liu. Discussion of: A statistical analysis of multiple temperature proxies: Are reconstructions of surface temperatures over the last 1000 years reliable?. 52--55.

Stephen McIntyre, Ross McKitrick. Discussion of: A statistical analysis of multiple temperature proxies: Are reconstructions of surface temperatures over the last 1000 years reliable?. 56--60.

Murali Haran, Nathan M. Urban. Discussion of: A statistical analysis of multiple temperature proxies: Are reconstructions of surface temperatures over the last 1000 years reliable?. 61--64.

Gavin A. Schmidt, Michael E. Mann, Scott D. Rutherford. Discussion of: A statistical analysis of multiple temperature proxies: Are reconstructions of surface temperatures over the last 1000 years reliable?. 65--70.

Lasse Holmström. Discussion of: A statistical analysis of multiple temperature proxies: Are reconstructions of surface temperatures over the last 1000 years reliable?. 71--75.

Jason E. Smerdon. Discussion of: A statistical analysis of multiple temperature proxies: Are reconstructions of surface temperatures over the last 1000 years reliable?. 76--79.

Doug Nychka, Bo Li. Discussion of: A statistical analysis of multiple temperature proxies: Are reconstructions of surface temperatures over the last 1000 years reliable?. 80--82.

Martin P. Tingley. Spurious predictions with random time series: The Lasso in the context of paleoclimatic reconstructions. Discussion of: A statistical analysis of multiple temperature proxies: Are reconstructions of surface temperatures over the last 1000 years reliable?. 83--87.

Peter Craigmile, Bala Rajaratnam. Discussion of: A statistical analysis of multiple temperature proxies: Are reconstructions of surface temperatures over the last 1000 years reliable?. 88--90.

Eugene R. Wahl, Caspar M. Ammann. Discussion of: A statistical analysis of multiple temperature proxies: Are reconstructions of surface temperatures over the last 1000 years reliable?. 91--95.

Jonathan Rougier. Discussion of: A statistical analysis of multiple temperature proxies: Are reconstructions of surface temperatures over the last 1000 years reliable?. 96--98.

Blakeley B. McShane, Abraham J. Wyner. Rejoinder. 99--123.

Chaitra H. Nagaraja, Lawrence D. Brown, Linda H. Zhao. An autoregressive approach to house price modeling. 124--149.

Stephan R. Sain, Reinhard Furrer, Noel Cressie. A spatial analysis of multivariate output from regional climate models. 150--175.

Mengxin Li, Wei-Liem Loh. Estimating the number of neurons in multi-neuronal spike trains. 176--200.

Lizhen Xu, Radu V. Craiu, Lei Sun. Bayesian methods to overcome the winner’s curse in genetic studies. 201--231.

Patrick Breheny, Jian Huang. Coordinate descent algorithms for nonconvex penalized regression, with applications to biological feature selection. 232--253.

Charles Sutton, Michael I. Jordan. Bayesian inference for queueing networks and modeling of internet services. 254--282.

Jeffrey S. Rosenthal, Albert H. Yoon. Detecting multiple authorship of United States Supreme Court legal decisions using function words. 283--308.

Pierre Latouche, Etienne Birmelé, Christophe Ambroise. Overlapping stochastic block models with application to the French political blogosphere. 309--336.

Jeff Goldsmith, Brian Caffo, Ciprian Crainiceanu, Daniel Reich, Yong Du, Craig Hendrix. Nonlinear tube-fitting for the analysis of anatomical and functional structures. 337--363.

Jonathan Gelfond, Lee Ann Zarzabal, Tarea Burton, Suzanne Burns, Mari Sogayar, Luiz O. F. Penalva. Latent rank change detection for analysis of splice-junction microarrays with nonlinear effects. 364--380.

Christopher P. Saunders, Linda J. Davis, Andrea C. Lamas, John J. Miller, Donald T. Gantz. Construction and evaluation of classifiers for forensic document analysis. 381--399.

Li Su, Joseph W. Hogan. HIV dynamics and natural history studies: Joint modeling with doubly interval-censored event time and infrequent longitudinal data. 400--426.

Peter Radchenko, Gareth M. James. Improved variable selection with Forward-Lasso adaptive shrinkage. 427--448.

Michael Parzen, Souparno Ghosh, Stuart Lipsitz, Debajyoti Sinha, Garrett M. Fitzmaurice, Bani K. Mallick, Joseph G. Ibrahim. A generalized linear mixed model for longitudinal binary data with a marginal logit link function. 449--467.

Sijian Wang, Bin Nan, Saharon Rosset, Ji Zhu. Random lasso. 468--485.

Karim Anaya-Izquierdo, Frank Critchley, Karen Vines. Orthogonal simple component analysis: A new, exploratory approach. 486--522.

David Bolin, Finn Lindgren. Spatial models generated by nested stochastic partial differential equations, with an application to global ozone mapping. 523--550.

Yangxin Huang, Hulin Wu, Jeanne Holden-Wiltse, Edward P. Acosta. A dynamic Bayesian nonlinear mixed-effects model of HIV response incorporating medication adherence, drug resistance and covariates. 551--577.

Sungkyu Jung, Mark Foskey, J. S. Marron. Principal arc analysis on direct product manifolds. 578--603.

Bhojnarine R. Rambharat, Anthony E. Brockwell. Sequential Monte Carlo pricing of American-style options under stochastic volatility models. 604--604.

The Annals of Applied Statistics, Volume 5, Number 2A (2011)

Wed, 13 Jul 2011 09:05 EDT

Contents:

Susan M. Paddock, Sarah B. Hunter, Katherine E. Watkins, Daniel F. McCaffrey. Analysis of rolling group therapy data using conditionally autoregressive priors. 605--627.

Daniel Percival, Kathryn Roeder, Roni Rosenfeld, Larry Wasserman. Structured, sparse regression with application to HIV drug resistance. 628--644.

David Siegmund, Benjamin Yakir, Nancy R. Zhang. Detecting simultaneous variant intervals in aligned sequences. 645--668.

Yazhen Wang. Quantum Monte Carlo simulation. 669--683.

Haiyong Xu, Frederic Paik Schoenberg. Point process modeling of wildfire hazard in Los Angeles County, California. 684--704.

Valeria D’Amato, Gabriella Piscopo, Maria Russolillo. The mortality of the Italian population: Smoothing techniques on the Lee–Carter model. 705--724.

Ruiyan Luo, Hongyu Zhao. Bayesian hierarchical modeling for signaling pathway inference from single cell interventional data. 725--745.

Xu Han, Dylan S. Small, Dean P. Foster, Vishal Patel. The effect of winning an Oscar Award on survival: Correcting for healthy performer survivor bias with a rank preserving structural accelerated failure time model. 746--772.

Daniel F. McCaffrey, J. R. Lockwood. Missing data in value-added modeling of teacher effects. 773--797.

Tze Leung Lai, Haipeng Xing, Zehao Chen. Mean–variance portfolio optimization when means and covariances are unknown. 798--823.

Jae Kwang Kim, Wayne A. Fuller, William R. Bell. Variance estimation for nearest neighbor imputation for US Census long form data. 824--842.

Anton H. Westveld, Peter D. Hoff. A mixed effects model for longitudinal relational and network data, with applications to international trade and conflict. 843--872.

Doug Speed, Simon Tavaré. Sparse Partitioning: Nonlinear regression with binary or tertiary predictors, with application to association studies. 873--893.

Jeffrey S. Morris, Veerabhadran Baladandayuthapani, Richard C. Herrick, Pietro Sanna, Howard Gutstein. Automated analysis of quantitative image data using isomorphic functional mixed models, with application to proteomics data. 894--923.

Ying Yuan, Guosheng Yin. Bayesian phase I/II adaptively randomized oncology trials with combined drugs. 924--942.

Amit Zeisel, Or Zuk, Eytan Domany. FDR control with adaptive procedures and FDR monotonicity. 943--968.

Adrian Dobra, Alex Lenkoski. Copula Gaussian graphical models and their application to modeling functional disability data. 969--993.

Jia Li, George C. Tseng. An adaptively weighted statistic for detecting differential gene expression when combining multiple transcriptomic studies. 994--1019.

Emily B. Fox, Erik B. Sudderth, Michael I. Jordan, Alan S. Willsky. A sticky HDP-HMM with application to speaker diarization. 1020--1056.

Michael Finegold, Mathias Drton. Robust graphical modeling of gene networks using classical and alternative t -distributions. 1057--1080.

Brent A. Johnson, Qi Long. Survival ensembles by the sum of pairwise differences with application to lung cancer microarray studies. 1081--1101.

Mark Fiecas, Hernando Ombao. The generalized shrinkage estimator for the analysis of functional connectivity of brain signals. 1102--1125.

The Annals of Applied Statistics, Volume 5, Number 2B (2011)

Wed, 13 Jul 2011 09:13 EDT

Contents:

Karen Kafadar. Special section on statistics in neuroscience. 1127--1131.

Xiaoyan Shi, Joseph G. Ibrahim, Jeffrey Lieberman, Martin Styner, Yimei Li, Hongtu Zhu. Two-stage empirical likelihood for longitudinal neuroimaging data. 1132--1158.

Vincent Q. Vu, Pradeep Ravikumar, Thomas Naselaris, Kendrick N. Kay, Jack L. Gallant, Bin Yu. Encoding and decoding V1 fMRI responses to natural images with sparse nonparametric models. 1159--1182.

Sourabh Bhattacharya, Ranjan Maitra. A nonstationary nonparametric Bayesian approach to dynamically modeling effective connectivity in functional magnetic resonance imaging experiments. 1183--1206.

Christopher J. Long, Patrick L. Purdon, Simona Temereanca, Neil U. Desai, Matti S. Hämäläinen, Emery N. Brown. State-space solutions to the dynamic magnetoencephalography inverse problem using high performance computing. 1207--1228.

Yuriy Mishchencko, Joshua T. Vogelstein, Liam Paninski. A Bayesian approach for inferring neuronal connectivity from calcium fluorescent imaging data. 1229--1261.

Robert E. Kass, Ryan C. Kelly, Wei-Liem Loh. Assessment of synchrony in multiple neural spike trains using loglinear point process models. 1262--1292.

Sofia C. Olhede, Brandon Whitcher. Nonparametric tests of structure for high angular resolution diffusion imaging in Q -space. 1293--1327.

Jenný Brynjarsdóttir, L. Mark Berliner. Bayesian hierarchical modeling for temperature reconstruction from geothermal data. 1328--1359.

Lorenzo Trippa, Giovanni Parmigiani. False discovery rates in somatic mutation studies of cancer. 1360--1378.

David S. Matteson, Mathew W. McLean, Dawn B. Woodard, Shane G. Henderson. Forecasting emergency medical service call arrival rates. 1379--1406.

Nozer D. Singpurwalla. Network routing in a dynamic environment. 1407--1424.

Andrew C. Thomas, Stephen E. Fienberg. Discussion of “Network routing in a dynamic environment”. 1425--1427.

Vishesh Karwa, Aleksandra B. Slavković, Eric T. Donnell. Causal inference in transportation safety studies: Comparison of potential outcomes and causal diagrams. 1428--1455.

Saijuan Zhang, Douglas Midthune, Patricia M. Guenther, Susan M. Krebs-Smith, Victor Kipnis, Kevin W. Dodd, Dennis W. Buckman, Janet A. Tooze, Laurence Freedman, Raymond J. Carroll. A new multivariate measurement error model with zero-inflated dietary data, and its application to dietary assessment. 1456--1487.

Leanna L. House, Merlise A. Clyde, Robert L. Wolpert. Bayesian nonparametric models for peak identification in MALDI-TOF mass spectroscopy. 1488--1511.

Irene Rocchetti, John Bunge, Dankmar Böhning. Population size estimation based upon ratios of recapture probabilities. 1512--1533.

David Knowles, Zoubin Ghahramani. Nonparametric Bayesian sparse factor models with application to gene expression modeling. 1534--1552.

Andrea Tancredi, Brunero Liseo. A hierarchical Bayesian approach to record linkage and population size problems. 1553--1585.

Rensheng R. Zhou, Nicoleta Serban, Nagi Gebraeel. Degradation modeling applied to residual lifetime prediction using functional data analysis. 1586--1610.

Björn Bornkamp, Frank Bretz, Holger Dette, José Pinheiro. Response-adaptive dose-finding under model uncertainty. 1611--1631.

Eric Gautier. Hierarchical Bayesian estimation of inequality measures with nonrectangular censored survey data with an application to wealth distribution of French households. 1632--1656.

Jo Bovy, David W. Hogg, Sam T. Roweis. Extreme deconvolution: Inferring complete distribution functions from noisy, heterogeneous and incomplete observations. 1657--1677.

Qingzhao Yu, Steven N. MacEachern, Mario Peruggia. Bayesian Synthesis: Combining subjective analyses, with an application to ozone data. 1678--1698.

Updated: The Annals of Applied Statistics, Volume 5, Number 2B (2011)

Wed, 27 Jul 2011 09:37 EDT

Contents:

Karen Kafadar. Special section on statistics in neuroscience. 1127--1131.

Xiaoyan Shi, Joseph G. Ibrahim, Jeffrey Lieberman, Martin Styner, Yimei Li, Hongtu Zhu. Two-stage empirical likelihood for longitudinal neuroimaging data. 1132--1158.

Yuriy Mishchenko, Joshua T. Vogelstein, Liam Paninski. A Bayesian approach for inferring neuronal connectivity from calcium fluorescent imaging data. 1229--1261.

Robert E. Kass, Ryan C. Kelly, Wei-Liem Loh. Assessment of synchrony in multiple neural spike trains using loglinear point process models. 1262--1292.

Sofia C. Olhede, Brandon Whitcher. Nonparametric tests of structure for high angular resolution diffusion imaging in Q -space. 1293--1327.

Jenný Brynjarsdóttir, L. Mark Berliner. Bayesian hierarchical modeling for temperature reconstruction from geothermal data. 1328--1359.

Lorenzo Trippa, Giovanni Parmigiani. False discovery rates in somatic mutation studies of cancer. 1360--1378.

David S. Matteson, Mathew W. McLean, Dawn B. Woodard, Shane G. Henderson. Forecasting emergency medical service call arrival rates. 1379--1406.

Nozer D. Singpurwalla. Network routing in a dynamic environment. 1407--1424.

Andrew C. Thomas, Stephen E. Fienberg. Discussion of “Network routing in a dynamic environment”. 1425--1427.

Vishesh Karwa, Aleksandra B. Slavković, Eric T. Donnell. Causal inference in transportation safety studies: Comparison of potential outcomes and causal diagrams. 1428--1455.

Leanna L. House, Merlise A. Clyde, Robert L. Wolpert. Bayesian nonparametric models for peak identification in MALDI-TOF mass spectroscopy. 1488--1511.

Irene Rocchetti, John Bunge, Dankmar Böhning. Population size estimation based upon ratios of recapture probabilities. 1512--1533.

David Knowles, Zoubin Ghahramani. Nonparametric Bayesian sparse factor models with application to gene expression modeling. 1534--1552.

Andrea Tancredi, Brunero Liseo. A hierarchical Bayesian approach to record linkage and population size problems. 1553--1585.

Rensheng R. Zhou, Nicoleta Serban, Nagi Gebraeel. Degradation modeling applied to residual lifetime prediction using functional data analysis. 1586--1610.

Björn Bornkamp, Frank Bretz, Holger Dette, José Pinheiro. Response-adaptive dose-finding under model uncertainty. 1611--1631.

Eric Gautier. Hierarchical Bayesian estimation of inequality measures with nonrectangular censored survey data with an application to wealth distribution of French households. 1632--1656.

Jo Bovy, David W. Hogg, Sam T. Roweis. Extreme deconvolution: Inferring complete distribution functions from noisy, heterogeneous and incomplete observations. 1657--1677.

Qingzhao Yu, Steven N. MacEachern, Mario Peruggia. Bayesian Synthesis: Combining subjective analyses, with an application to ozone data. 1678--1698.

The Annals of Applied Statistics, Volume 5, Number 3 (2011)

Thu, 13 Oct 2011 09:59 EDT

Contents:

Juliette Blanchet, Anthony C. Davison. Spatial modeling of extreme snow depth. 1699--1725.

Danny Pfeffermann, Victoria Landsman. Are private schools better than public schools? Appraisal for Ireland by methods for observational studies. 1726--1751.

Qunhua Li, James B. Brown, Haiyan Huang, Peter J. Bickel. Measuring reproducibility of high-throughput experiments. 1752--1779.

Yongtao Guan, Matthew Stephens. Bayesian variable selection regression for genome-wide association studies and other large-scale problems. 1780--1815.

Gail E. Potter, Mark S. Handcock, Ira M. Longini, Jr., M. Elizabeth Halloran. Estimating within-household contact networks from egocentric data. 1816--1838.

Deepak Agarwal, Liang Zhang, Rahul Mazumder. Modeling item–item similarities for personalized recommendations on Yahoo! front page. 1839--1875.

Corwin M. Zigler, Thomas R. Belin. The potential for bias in principal causal effect estimation when treatment received depends on a key covariate. 1876--1892.

Yuriy Mishchenko, Liam Paninski. Efficient methods for sampling spike trains in networks of coupled neurons. 1893--1919.

O. Stenzel, H. Hassfeld, R. Thiedmann, L. J. A. Koster, S. D. Oosterhout, S. S. van Bavel, M. M. Wienk, J. Loos, R. A. J. Janssen, V. Schmidt. Spatial modeling of the 3D morphology of hybrid polymer-ZnO solar cells, based on electron tomography data. 1920--1947.

Sabyasachi Mukhopadhyay, Sourabh Bhattacharya, Kajal Dihidar. On Bayesian “central clustering”: Application to landscape classification of Western Ghats. 1948--1977.

Francesco C. Stingo, Yian A. Chen, Mahlet G. Tadesse, Marina Vannucci. Incorporating biological information into linear models: A Bayesian approach to the selection of pathways and genes. 1978--2002.

Qi Long, Matthias Chung, Carlos S. Moreno, Brent A. Johnson. Risk prediction for prostate cancer recurrence through regularized estimation with simultaneous adjustment for nonlinear clinical effects. 2003--2023.

Nicoleta Serban. A space–time varying coefficient model: The equity of service accessibility. 2024--2051.

Yu Zhang, Jing Zhang, Jun S. Liu. Block-based Bayesian epistasis association mapping with application to WTCCC type 1 diabetes data. 2052--2077.

Debashis Paul, Jie Peng, Prabir Burman. Semiparametric modeling of autonomous nonlinear dynamical systems with application to plant growth. 2078--2108.

Zeny Feng, William W. L. Wong, Xin Gao, Flavio Schenkel. Generalized genetic association study with samples of related individuals. 2109--2130.

Charlotte Soneson, Magnus Fontes. A method for visual identification of small sample subgroups and potential biomarkers. 2131--2149.

Miguel A. Martinez-Beneito, Gonzalo García-Donato, Diego Salmerón. A Bayesian Joinpoint regression model with an unknown number of break-points. 2150--2168.

Daniel Samarov, J. S. Marron, Yufeng Liu, Christopher Grulke, Alexander Tropsha. Local kernel canonical correlation analysis with application to virtual drug screening. 2169--2196.

Georg M. Goerg. Lambert W random variables—a new family of generalized skewed distributions with applications to risk estimation. 2197--2230.

Thomas Kitching, Adam Amara, Mandeep Gill, Stefan Harmeling, Catherine Heymans, Richard Massey, Barnaby Rowe, Tim Schrabback, Lisa Voigt, Sreekumar Balan, Gary Bernstein, Matthias Bethge, Sarah Bridle, Frederic Courbin, Marc Gentile, Alan Heavens, Michael Hirsch, Reshad Hosseini, Alina Kiessling, Donnacha Kirk, Konrad Kuijken, Rachel Mandelbaum, Baback Moghaddam, Guldariya Nurbaeva, Stephane Paulin-Henriksson, Anais Rassat, Jason Rhodes, Bernhard Schölkopf, John Shawe-Taylor, Marina Shmakova, Andy Taylor, Malin Velander, Ludovic van Waerbeke, Dugan Witherick, David Wittman. Gravitational Lensing Accuracy Testing 2010 (GREAT10) Challenge Handbook. 2231--2263.

The Annals of Applied Statistics, Volume 5, Number 4 (2011)

Tue, 20 Dec 2011 11:47 EST

Contents:

Karen Kafadar. Special section on modern multivariate analysis. 2265--2265.

Omar De la Cruz, Susan Holmes. The duality diagram in data analysis: Examples of modern applications. 2266--2277.

Stéphane Dray, Thibaut Jombart. Revisiting Guerry’s data: Introducing spatial constraints in multivariate analysis. 2278--2299.

Jean Thioulouse. Simultaneous analysis of a sequence of paired ecological tables: A comparison of several methods. 2300--2325.

Elizabeth Purdom. Analysis of a data matrix and a graph: Metagenomic data and the phylogenetic tree. 2326--2358.

Stefano Conti, Anne M. Presanis, Maaike G. van Veen, Maria Xiridou, Martin C. Donoghoe, Annemarie Rinder Stengaard, Daniela De Angelis. Modeling of the HIV infection epidemic in the Netherlands: A multi-parameter evidence synthesis approach. 2359--2384.

Luis Gutiérrez, Fernando A. Quintana. Multivariate Bayesian semiparametric models for authentication of food and beverages. 2385--2402.

Jacob Bien, Robert Tibshirani. Prototype selection for interpretable classification. 2403--2424.

Brian J. Reich, Jo Eidsvik, Michele Guindani, Amy J. Nail, Alexandra M. Schmidt. A class of covariate-dependent spatiotemporal covariance functions for the analysis of daily ozone concentration. 2425--2447.

Adam R. Brentnall, Stephen W. Duffy, Martin J. Crowder, Maureen G. C. Gillan, Susan M. Astley, Matthew G. Wallis, Jonathan James, Caroline R. M. Boggis, Fiona J. Gilbert. A method for exploratory repeated-measures analysis applied to a breast-cancer screening study. 2448--2469.

Cari G. Kaufman, Derek Bingham, Salman Habib, Katrin Heitmann, Joshua A. Frieman. Efficient emulators of computer experiments using compactly supported correlation functions, with an application to cosmology. 2470--2492.

Daniela M. Witten. Classification and clustering of sequencing data using a Poisson model. 2493--2518.

Huiyan Sang, Mikyoung Jun, Jianhua Z. Huang. Covariance approximation for large multivariate spatial data sets with an application to multiple climate model errors. 2519--2548.

Robert Alan Clements, Frederic Paik Schoenberg, Danijel Schorlemmer. Residual analysis methods for space–time point processes with applications to earthquake forecast models in California. 2549--2571.

Victor M. Panaretos, Kjell Konis. Sparse approximations of protein structure from noisy random projections. 2572--2602.

Irina Czogiel, Ian L. Dryden, Christopher J. Brignell. Bayesian matching of unlabeled marked point sets using random fields, with an application to molecular alignment. 2603--2629.

Jianxin Yin, Hongzhe Li. A sparse conditional Gaussian graphical model for analysis of genetical genomics data. 2630--2650.

Enrique F. Schisterman, Albert Vexler, Aijun Ye, Neil J. Perkins. A combined efficient design for biomarker data subject to a limit of detection due to measuring instrument sensitivity. 2651--2667.

Hui Shen, William J. Welch, Jacqueline M. Hughes-Oliver. Efficient, adaptive cross-validation for tuning and comparing models, with application to drug discovery. 2668--2687.

The Annals of Applied Statistics, Volume 6, Number 1 (2012)

Tue, 06 Mar 2012 09:17 EST

Contents:

Gail E. Potter, Mark S. Handcock, Ira M. Longini, M. Elizabeth Halloran. Estimating within-school contact networks to understand influenza transmission. 1--26.

Zhiwei Zhang, Paul S. Albert, Bruce Simons-Morton. Marginal analysis of longitudinal count data in long sequences: Methods and applications to a driving study. 27--54.

Edward I. George, Sam K. Hui. Optimal pricing using online auction experiments: A Pólya tree approach. 55--82.

Paul R. Rosenbaum. An exact adaptive test with superior design sensitivity in an observational study of treatments for ovarian cancer. 83--105.

Michael D. Porter, Gentry White. Self-exciting hurdle models for terrorist activity. 106--124.

Stéphanie Allassonnière, Laurent Younes. A stochastic algorithm for probabilistic independent component analysis. 125--160.

Nicholas G. Polson, James G. Scott. Good, great, or lucky? Screening for firms with sustained superior performance using heavy-tailed priors. 161--185.

Antonio Galves, Charlotte Galves, Jesús E. García, Nancy L. Garcia, Florencia Leonardi. Context tree selection and linguistic rhythm retrieval from written texts. 186--209.

Lucio Barabesi, Sara Franceschi, Marzia Marcheselli. Properties of design-based estimation under stratified spatial sampling with application to canopy coverage estimation. 210--228.

Hao Wang, Jerome P. Reiter. Multiple imputation for sharing precise geographies in public use data. 229--252.

Ronny Luss, Saharon Rosset, Moni Shahar. Efficient regularized isotonic regression with application to gene–gene interaction search. 253--283.

Hedibert F. Lopes, Alexandra M. Schmidt, Esther Salazar, Mariana Gómez, Marcel Achkar. Measuring the vulnerability of the Uruguayan population to vector-borne diseases via spatially hierarchical factor models. 284--303.

Andrea Riebler, Leonhard Held, Håvard Rue. Estimation and extrapolation of time trends in registry data—Borrowing strength from related populations. 304--333.

Peng Wei, Wei Pan. Bayesian joint modeling of multiple gene networks and diverse genomic data to identify target genes of a transcription factor. 334--355.

Chung-Hsing Chen, Wen-Chi Su, Chih-Yu Chen, Jing-Ying Huang, Fang-Yu Tsai, Wen-Chang Wang, Chao A. Hsiung, King-Song Jeng, I-Shou Chang. A Bayesian measurement error model for two-channel cell-based RNAi data with replicates. 356--382.

Joseph W. Richards, Ann B. Lee, Chad M. Schafer, Peter E. Freeman. Prototype selection for parameter estimation in complex models. 383--408.

Ying Wei, Zhibiao Zhao, Dennis K. J. Lin. Profile control charts based on nonparametric L -1 regression methods. 409--427.

The Annals of Applied Statistics, Volume 6, Number 2 (2012)

Mon, 11 Jun 2012 09:00 EDT

Contents:

Karen Kafadar. Special section: Statistical methods for next-generation gene sequencing data. 429--431.

Zhen Li, Vikneswaran Gopal, Xiaobo Li, John M. Davis, George Casella. Simultaneous SNP identification in association studies with missing data. 432--456.

Baiyu Zhou, Alice S. Whittemore. Improving sequence-based genotype calls with linkage disequilibrium and pedigree information. 457--475.

Jeremy J. Shen, Nancy R. Zhang. Change-point model on nonhomogeneous Poisson processes with application in copy number profiling by next-generation DNA sequencing. 476--496.

Xi Kathy Zhou, Fei Liu, Andrew J. Dannenberg. A Bayesian model averaging approach for observational gene expression studies. 497--520.

Loki Natarajan, Minya Pu, Karen Messer. Statistical tests for the intersection of independent lists of genes: Sensitivity, FDR, and type I error control. 521--541.

Donatello Telesca, Peter Müller, Giovanni Parmigiani, Ralph S. Freedman. Modeling dependent gene expression. 542--560.

Laurent Jacob, Pierre Neuvial, Sandrine Dudoit. More power via graph-structured tests for differential expression of gene networks. 561--600.

Chong Liu, Surajit Ray, Giles Hooker, Mark Friedl. Functional factor analysis for periodic remote sensing data. 601--624.

Brian M. Hartman, Bani K. Mallick, Debabrata Talukdar. Investigating international new product diffusion speed: A semiparametric approach. 625--651.

Tyler H. McCormick, Cynthia Rudin, David Madigan. Bayesian hierarchical rule modeling for predicting medical conditions. 652--668.

Oleksandr Gromenko, Piotr Kokoszka, Lie Zhu, Jan Sojka. Estimation and testing for spatially indexed curves with application to ionospheric and magnetic field trends. 669--696.

Yu Ryan Yue, Martin A. Lindquist, Ji Meng Loh. Meta-analysis of functional neuroimaging data using Bayesian nonparametric binary regression. 697--718.

Xi Chen, Qihang Lin, Seyoung Kim, Jaime G. Carbonell, Eric P. Xing. Smoothing proximal gradient method for general structured sparse regression. 719--752.

Guangyu Zhang, Ying Yuan. Bayesian modeling longitudinal dyadic data with nonignorable dropout, with application to a breast cancer study. 753--771.

Polly Phipps, Daniell Toth. Analyzing establishment nonresponse using an interpretable regression tree model with linked administrative data. 772--794.

Julien Chiquet, Yves Grandvalet, Camille Charbonnier. Sparsity with sign-coherent groups of variables via the cooperative-Lasso. 795--830.

The Annals of Applied Statistics, Volume 6, Number 3 (2012)

Fri, 31 Aug 2012 09:10 EDT

Contents:

Peter G. M. van der Heijden, Joe Whittaker, Maarten Cruyff, Bart Bakker, Rik van der Vliet. People born in the Middle East but residing in the Netherlands: Invariant population size estimates and the role of active and passive covariates. 831--852.

Kanti V. Mardia, Emma M. Petty, Charles C. Taylor. Matching markers and unlabeled configurations in protein gels. 853--869.

Spencer Hays, Haipeng Shen, Jianhua Z. Huang. Functional dynamic factor models with application to yield curve forecasting. 870--894.

Art B. Owen, Dean Eckles. Bootstrapping data arrays of arbitrary order. 895--927.

Juli Atherton, Nathan Boley, Ben Brown, Nobuo Ogawa, Stuart M. Davidson, Michael B. Eisen, Mark D. Biggin, Peter Bickel. A model for sequential evolution of ligands by exponential enrichment (SELEX) data. 928--949.

Chao Du, S. C. Kou. Correlation analysis of enzymatic reaction of a single protein molecule. 950--976.

Antoine Chambaz, Christophe Denis. Classification in postural style. 977--993.

Bryony J. Hill, Wilfrid S. Kendall, Elke Thönnes. Fibre-generated point processes and fields of orientations. 994--1020.

Tian Siva Tian, Jianhua Z. Huang, Haipeng Shen, Zhimin Li. A two-way regularization method for MEG source reconstruction. 1021--1046.

Omkar Muralidharan, Georges Natsoulis, John Bell, Hanlee Ji, Nancy R. Zhang. Detecting mutations in mixed sample sequencing data using empirical Bayes. 1047--1067.

Natallia Katenka, Eric D. Kolaczyk. Inference and characterization of multi-attribute networks with application to computational biology. 1068--1094.

Seyoung Kim, Eric P. Xing. Tree-guided group lasso for multi-response regression with structured sparsity, with an application to eQTL mapping. 1095--1117.

Steven P. Lund, Dan Nettleton. The importance of distinct modeling strategies for gene and gene-specific treatment effects in hierarchical models for microarray data. 1118--1133.

Shaoyu Li, Yuehua Cui. Gene-centric gene–gene interaction: A model-based kernel machine method. 1134--1161.

Yong Wang, Ilze Ziedins, Mark Holmes, Neil Challands. Tree models for difference and change detection in a complex environment. 1162--1184.

Anastasia Voulgaraki, Benjamin Kedem, Barry I. Graubard. Semiparametric regression in testicular germ cell data. 1185--1208.

Chris. J. Oates, Sach Mukherjee. Network inference and biological dynamics. 1209--1235.

Hai Liu, Shuangge Ma, Richard Kronmal, Kung-Sik Chan. Semiparametric zero-inflated modeling in multi-ethnic study of atherosclerosis (MESA). 1236--1255.

Ying Hung. Order selection in nonlinear time series models with application to the study of cell memory. 1256--1279.

Donghui Yan, Pei Wang, Michael Linden, Beatrice Knudsen, Timothy Randolph. Statistical methods for tissue array images—algorithmic scoring and co-training. 1280--1305.

Yue S. Niu, Heping Zhang. The screening and ranking algorithm to detect DNA copy number variations. 1306--1326.

Matthias Kormaksson, James G. Booth, Maria E. Figueroa, Ari Melnick. Integrative Model-based clustering of microarray methylation and expression data. 1327--1347.

The Annals of Applied Statistics, Volume 6, Number 4 (2012)

Thu, 27 Dec 2012 12:24 EST

Contents:

Tilmann Gneiting. Section on the special year for mathematics of planet earth (MPE 2013). 1349--1351.

Andrew W. Baggaley, Richard J. Boys, Andrew Golightly, Graeme R. Sarson, Anvar Shukurov. Inference for population dynamics in the Neolithic period. 1352--1376.

Panu Erästö, Lasse Holmström, Atte Korhola, Jan Weckström. Finding a consensus on credible features among several paleoclimate reconstructions. 1377--1405.

Daniel Cooley, Richard A. Davis, Philippe Naveau. Approximating the conditional density given large observed values via a multivariate extremes framework, with application to environmental data. 1406--1429.

Brian J. Reich, Benjamin A. Shaby. A hierarchical max-stable spatial model for extreme precipitation. 1430--1451.

Fabio Sigrist, Hans R. Künsch, Werner A. Stahel. A dynamic nonstationary spatio-temporal model for short term prediction of precipitation. 1452--1477.

Giovanna Jona-Lasinio, Alan Gelfand, Mattia Jona-Lasinio. Spatial analysis of wave direction data using wrapped Gaussian processes. 1478--1498.

Janine B. Illian, Sigrunn H. Sørbye, Håvard Rue. A toolbox for fitting complex spatial point process models using integrated nested Laplace approximation (INLA). 1499--1530.

Trond Reitan, Tore Schweder, Jorijntje Henderiks. Phenotypic evolution studied by layered stochastic differential equations. 1531--1551.

S. N. Lahiri, C. Spiegelman, J. Appiah, L. Rilett. Gap bootstrap methods for massive data sets with an application to transportation engineering. 1552--1587.

Jeng-Min Chiou. Dynamical functional prediction and classification, with application to traffic flow prediction. 1588--1614.

Gelila Tilahun, Andrey Feuerverger, Michael Gervers. Dating medieval English charters. 1615--1640.

Candemir Çiğşar, Jerald F. Lawless. Assessing transient carryover effects in recurrent event processes, with application to chronic health conditions. 1641--1663.

Yunting Sun, Nancy R. Zhang, Art B. Owen. Multiple hypothesis testing adjusted for latent variables, with an application to the AGEMAP gene expression data. 1664--1688.

Hao Wang, Saul Shiffman, Sandra D. Griffith, Daniel F. Heitjan. Truth and memory: Linking instantaneous and retrospective self-reported cigarette consumption. 1689--1706.

Trina Patel, Donatello Telesca, Saji George, André E. Nel. Toxicity profiling of engineered nanomaterials via multivariate dose-response surface modeling. 1707--1729.

Vural Aksakalli, Elvan Ceyhan. Optimal obstacle placement with disambiguations. 1730--1774.

Qunhua Li, Jimmy K. Eng, Matthew Stephens. A likelihood-based scoring method for peptide identification using mass spectrometry. 1775--1794.

Tyler H. McCormick, Tian Zheng. Latent demographic profile estimation in hard-to-reach groups. 1795--1813.

Juned Siddique, Ofer Harel, Catherine M. Crespi. Addressing missing data mechanism uncertainty using multiple-model multiple imputation: Application to a longitudinal clinical trial. 1814--1837.

Shan Ba, V. Roshan Joseph. Composite Gaussian process models for emulating expensive functions. 1838--1860.

Hai Liu, Wanzhu Tu. A semiparametric regression model for paired longitudinal outcomes with application in childhood blood pressure development. 1861--1882.

M. Filippone, A. F. Marquand, C. R. V. Blain, S. C. R. Williams, J. Mourão-Miranda, M. Girolami. Probabilistic prediction of neurological disorders with a statistical assessment of neuroimaging data modalities. 1883--1905.

John A. D. Aston, Claudia Kirch. Evaluating stationarity via change-point alternatives with applications to fMRI data. 1906--1948.

Guido Masarotto, Cristiano Varin. The ranking lasso and its application to sport tournaments. 1949--1970.

Bradley Efron. Bayesian inference and the parametric bootstrap. 1971--1997.

Updated: The Annals of Applied Statistics, Volume 6, Number 4 (2012)

Wed, 30 Jan 2013 09:06 EST

Contents:

Tilmann Gneiting. Section on the special year for mathematics of planet earth (MPE 2013). 1349--1351.

Andrew W. Baggaley, Richard J. Boys, Andrew Golightly, Graeme R. Sarson, Anvar Shukurov. Inference for population dynamics in the Neolithic period. 1352--1376.

Panu Erästö, Lasse Holmström, Atte Korhola, Jan Weckström. Finding a consensus on credible features among several paleoclimate reconstructions. 1377--1405.

Brian J. Reich, Benjamin A. Shaby. A hierarchical max-stable spatial model for extreme precipitation. 1430--1451.

Fabio Sigrist, Hans R. Künsch, Werner A. Stahel. A dynamic nonstationary spatio-temporal model for short term prediction of precipitation. 1452--1477.

Giovanna Jona-Lasinio, Alan Gelfand, Mattia Jona-Lasinio. Spatial analysis of wave direction data using wrapped Gaussian processes. 1478--1498.

Janine B. Illian, Sigrunn H. Sørbye, Håvard Rue. A toolbox for fitting complex spatial point process models using integrated nested Laplace approximation (INLA). 1499--1530.

Trond Reitan, Tore Schweder, Jorijntje Henderiks. Phenotypic evolution studied by layered stochastic differential equations. 1531--1551.

S. N. Lahiri, C. Spiegelman, J. Appiah, L. Rilett. Gap bootstrap methods for massive data sets with an application to transportation engineering. 1552--1587.

Jeng-Min Chiou. Dynamical functional prediction and classification, with application to traffic flow prediction. 1588--1614.

Gelila Tilahun, Andrey Feuerverger, Michael Gervers. Dating medieval English charters. 1615--1640.

Candemir Çiğşar, Jerald F. Lawless. Assessing transient carryover effects in recurrent event processes, with application to chronic health conditions. 1641--1663.

Yunting Sun, Nancy R. Zhang, Art B. Owen. Multiple hypothesis testing adjusted for latent variables, with an application to the AGEMAP gene expression data. 1664--1688.

Hao Wang, Saul Shiffman, Sandra D. Griffith, Daniel F. Heitjan. Truth and memory: Linking instantaneous and retrospective self-reported cigarette consumption. 1689--1706.

Trina Patel, Donatello Telesca, Saji George, André E. Nel. Toxicity profiling of engineered nanomaterials via multivariate dose-response surface modeling. 1707--1729.

Vural Aksakalli, Elvan Ceyhan. Optimal obstacle placement with disambiguations. 1730--1774.

Qunhua Li, Jimmy K. Eng, Matthew Stephens. A likelihood-based scoring method for peptide identification using mass spectrometry. 1775--1794.

Tyler H. McCormick, Tian Zheng. Latent demographic profile estimation in hard-to-reach groups. 1795--1813.

Shan Ba, V. Roshan Joseph. Composite Gaussian process models for emulating expensive functions. 1838--1860.

Hai Liu, Wanzhu Tu. A semiparametric regression model for paired longitudinal outcomes with application in childhood blood pressure development. 1861--1882.

John A. D. Aston, Claudia Kirch. Evaluating stationarity via change-point alternatives with applications to fMRI data. 1906--1948.

Guido Masarotto, Cristiano Varin. The ranking lasso and its application to sport tournaments. 1949--1970.

Bradley Efron. Bayesian inference and the parametric bootstrap. 1971--1997.

The Annals of Applied Statistics, Volume 7, Number 1 (2013)

Tue, 09 Apr 2013 13:07 EDT

Contents:

Micha Mandel, Manor Askenazi, Yi Zhang, Jarrod A. Marto. Variance function estimation in quantitative mass spectrometry with application to iTRAQ labeling. 1--24.

José R. Zubizarreta, Dylan S. Small, Neera K. Goyal, Scott Lorch, Paul R. Rosenbaum. Stronger instruments via integer programming in an observational study of late preterm birth outcomes. 25--50.

Robert B. Gramacy, Matt Taddy, Stefan M. Wild. Variable selection and sensitivity analysis using dynamic trees, with an application to computer code performance tuning. 51--80.

Francesco Finazzi. Geostatistical modeling in the presence of interaction between the measuring instruments, with an application to the estimation of spatial market potentials. 81--101.

Ying Yuan, Hongtu Zhu, Martin Styner, John H. Gilmore, J. S. Marron. Varying coefficient model for modeling diffusion tensors along white matter tracts. 102--125.

Xiaojing Wang, James O. Berger, Donald S. Burdick. Bayesian analysis of dynamic item response models in educational testing. 126--153.

Harrison Quick, Sudipto Banerjee, Bradley P. Carlin. Modeling temporal gradients in regionally aggregated California asthma hospitalization data. 154--176.

Arnošt Komárek, Lenka Komárková. Clustering for multivariate continuous and discrete longitudinal data. 177--200.

Tao Yu, Chunming Zhang, Andrew L. Alexander, Richard J. Davidson. Local tests for identifying anisotropic diffusion areas in human brain with DTI. 201--225.

Andreas Alfons, Christophe Croux, Sarah Gelper. Sparse least trimmed squares regression for analyzing high-dimensional large data sets. 226--248.

Jingyuan Yang, Shili Lin. Robust partial likelihood approach for detecting imprinting and maternal effects using case-control families. 249--268.

Ronglai Shen, Sijian Wang, Qianxing Mo. Sparse integrative clustering of multiple omics data sets. 269--294.

Winston Lin. Agnostic notes on regression adjustments to experimental data: Reexamining Freedman’s critique. 295--318.

Debbie J. Dupuis, Maria-Pia Victoria-Feser. Robust VIF regression with application to variable selection in large data sets. 319--341.

Minge Xie, Regina Y. Liu, C. V. Damaraju, William H. Olson. Incorporating external information in analyses of clinical trials with binary outcomes. 342--368.

Matti Pirinen, Peter Donnelly, Chris C. A. Spencer. Efficient computation with a linear mixed model on large-scale data sets with applications to genetic studies. 369--390.

Shuang Li, Li Hsu, Jie Peng, Pei Wang. Bootstrap inference for network construction with an application to a breast cancer microarray study. 391--417.

Jun Chen, Hongzhe Li. Variable selection for sparse Dirichlet-multinomial regression with an application to microbiome data analysis. 418--442.

Kosuke Imai, Marc Ratkovic. Estimating treatment effect heterogeneity in randomized program evaluation. 443--470.

Armin Schwartzman, Andrew Jaffe, Yulia Gavrilov, Clifford A. Meyer. Multiple testing of local maxima for detection of peaks in ChIP-Seq data. 471--494.

Wei-Yin Loh, Wei Zheng. Regression trees for longitudinal and multiresponse data. 495--522.

Eric F. Lock, Katherine A. Hoadley, J. S. Marron, Andrew B. Nobel. Joint and individual variation explained (JIVE) for integrated analysis of multiple data types. 523--542.

Jaeil Ahn, Bhramar Mukherjee, Stephen B. Gruber, Malay Ghosh. Bayesian semiparametric analysis for two-phase studies of gene-environment interaction. 543--569.

Robert T. Krafty, Martica Hall. Canonical correlation analysis between time series and static outcomes, with application to the spectral analysis of heart rate variability. 570--587.

William Kleiber, Richard W. Katz, Balaji Rajagopalan. Daily minimum and maximum temperature simulation over complex terrain. 588--612.