The Annals of Statistics

Semiparametric detection of significant activation for brain fMRI

Chunming Zhang and Tao Yu

Source: Ann. Statist. Volume 36, Number 4 (2008), 1693-1725.

Abstract

Functional magnetic resonance imaging (fMRI) aims to locate activated regions in human brains when specific tasks are performed. The conventional tool for analyzing fMRI data applies some variant of the linear model, which is restrictive in modeling assumptions. To yield more accurate prediction of the time-course behavior of neuronal responses, the semiparametric inference for the underlying hemodynamic response function is developed to identify significantly activated voxels. Under mild regularity conditions, we demonstrate that a class of the proposed semiparametric test statistics, based on the local linear estimation technique, follow χ2 distributions under null hypotheses for a number of useful hypotheses. Furthermore, the asymptotic power functions of the constructed tests are derived under the fixed and contiguous alternatives. Simulation evaluations and real fMRI data application suggest that the semiparametric inference procedure provides more efficient detection of activated brain areas than the popular imaging analysis tools AFNI and FSL.

Primary Subjects: 62G08, 62G10
Secondary Subjects: 62F30, 65F50
Keywords: deconvolution; local polynomial regression; nonparametric test; spatio-temporal data; stimuli; time resolution

Full-text: Access denied (no subscription detected)

We're sorry, but we are unable to provide you with the full text of this article because we are not able to identify you as a subscriber.
If you have a personal subscription to this journal, then please login. If you are already logged in, then you may need to update your profile to register your subscription. Read more about accessing full-text
Links and Identifiers

Permanent link to this document: http://projecteuclid.org/euclid.aos/1216237297
Digital Object Identifier: doi:10.1214/07-AOS519
Mathematical Reviews number (MathSciNet): MR2435453
Zentralblatt MATH identifier: 1142.62026

References

Bickel, P. J. and Levina, E. (2008). Regularized estimation of large covariance matrices. Ann. Statist. 36 199–227.
Mathematical Reviews (MathSciNet): MR2387969
Digital Object Identifier: doi:10.1214/009053607000000758
Project Euclid: euclid.aos/1201877299
Bickel, P. J. and Li, B. (2006). Regularization in statistics (with discussion). Test 15 271–344.
Mathematical Reviews (MathSciNet): MR2273731
Digital Object Identifier: doi:10.1007/BF02607055
Benjamini, Y. and Hochberg, Y. (1995). Controlling the false discovery rate: A practical and powerful approach to multiple testing. J. Roy. Statist. Soc. Ser. B 57 289–300.
Mathematical Reviews (MathSciNet): MR1325392
Bosq, D. (1998). Nonparametric Statistics for Stochastic Processes: Estimation and Prediction, 2nd ed. Springer, Berlin.
Mathematical Reviews (MathSciNet): MR1640691
Zentralblatt MATH: 0902.62099
Cox, R. W. (1996). AFNI: Software for analysis and visualization of functional magnetic resonance neuroimages. Comput. Biomed. Res. 29 162–73.
Demko, S., Moss, W. F. and Smith, P. W. (1984). Decay rates for inverses of band matrices. Math. Comp. 43 491–499.
Mathematical Reviews (MathSciNet): MR758197
Digital Object Identifier: doi:10.2307/2008290
Fahrmeir, L. and Gössl, C. (2002). Semiparametric Bayesian models for human brain mapping. Statistical Modelling 2 235–250.
Mathematical Reviews (MathSciNet): MR1951702
Digital Object Identifier: doi:10.1191/1471082x02st040oa
Fan, J. and Gijbels, I. (1996). Local Polynomial Modeling and Its Applications. Chapman and Hall, London.
Mathematical Reviews (MathSciNet): MR1383587
Zentralblatt MATH: 0873.62037
Fan, J. and Yao, Q. (2003). Nonlinear Time Series: Nonparametric and Parametric Methods. Springer, New York.
Mathematical Reviews (MathSciNet): MR1964455
Zentralblatt MATH: 1014.62103
Fan, J., Zhang, C. M. and Zhang, J. (2001). Generalized likelihood ratio statistics and Wilks phenomenon. Ann. Statist. 29 153–193.
Mathematical Reviews (MathSciNet): MR1833962
Digital Object Identifier: doi:10.1214/aos/996986505
Project Euclid: euclid.aos/996986505
Friston, K. J. et. al. (1997). SPM course notes. Available at http://www.fil.ion.ucl.ac.uk/spm/.
Genovese, C. R. (2000). A Bayesian time-course model for functional magnetic resonance imaging data (with discussion). J. Amer. Statist. Assoc. 95 691–703.
Glover, G. H. (1999). Deconvolution of impulse response in event-related BOLD fMRI. NeuroImage 9 416–429.
Golub, G. H. and Van Loan, C. F. (1996). Matrix Computations, 3rd ed. Johns Hopkins Univ. Press, Baltimore, MD.
Mathematical Reviews (MathSciNet): MR1417720
Zentralblatt MATH: 0865.65009
Goutte, C., Nielsen, F. A. and Hansen, L. K. (2000). Modeling the haemodynamic response in fMRI using smooth FIR filters. IEEE Trans. Med. Imag. 19 1188–1201.
Josephs, O. and Henson, R. N. A. (1999). Event-related functional magnetic resonance imaging: Modelling, inference and optimization. Philos. Trans. Roy. Soc. 354 1215–1228.
Lange, N. (1996). Tutorial in biostatistics: Statistical approaches to human brain mapping by functional magnetic resonance imaging. Statistics in Medicine 15 389–428.
Lange, N. and Zeger, S. L. (1997). Non-linear Fourier times series analysis for human brain mapping by functional magnetic resonance imaging. Appl. Statist. 46 1–29.
Mathematical Reviews (MathSciNet): MR1452285
Digital Object Identifier: doi:10.1111/1467-9876.00046
Lazar, N. A, Eddy, W. F., Genovese, C. R. and Welling, J. (2001). Statistical issues in fMRI for brain imaging. Internat. Statist. Rev. 69 105–127.
Lu, Y. (2006). Contributions to functional data analysis with biological applications. Ph.D. dissertation, Dept. Statistics, Univ. Wisconsin, Madison.
Purdon, P. L., Solo, V., Weissko, R. M. and Brown, E. (2001). Locally regularized spatio temporal modeling and model comparison for functional MRI. NeuroImage 14 912–923.
Shao, J. (2003). Mathematical Statistics, 2nd ed. Springer, New York.
Mathematical Reviews (MathSciNet): MR2002723
Zentralblatt MATH: 1018.62001
Silverman, B. W. (1986). Density Estimation For Statistics and Data Analysis. Chapman and Hall, London.
Mathematical Reviews (MathSciNet): MR848134
Zentralblatt MATH: 0617.62042
Smith, S., Jenkinson, M., Woolrich, M., Beckmann, C. F., Behrens, T. E. J., Johansen-Berg, H., Bannister, P. R., De Luca, M., Drobnjak, I. Flitney, D. E., Niazy, R. K., Saunders, J., Vickers, J., Zhang, Y., De Stefano, N., Brady, J. M. and Matthews, P. M. (2004). Advances in functional and structural MR image analysis and implementation as FSL. NeuroImage 23 208–219.
Storey, J. D. (2002). A direct approach to false discovery rates. J. Roy. Statist. Soc. Ser. B 64 479–498.
Mathematical Reviews (MathSciNet): MR1924302
Digital Object Identifier: doi:10.1111/1467-9868.00346
Ward, B. D. (2001). Deconvolution analysis of fMRI time series data. Technical report, Biophysics Research Institute, Medical College of Wisconsin.
Woolrich, M. W., Ripley, B. D., Brady, M. and Smith, S. M. (2001). Temporal autocorrelation in univariate linear modelling of fMRI data. NeuroImage 14 1370–1386.
Worsley, K. J. and Friston, K. J. (1995). Analysis of fMRI time-series revisited-again. NeuroImage 2 173–181.
Worsley, K. J., Liao, C. H., Aston, J., Petre, V., Duncan, G. H., Morales, F. and Evans, A. C. (2002). A general statistical analysis for fMRI data. NeuroImage 15 1–15.
Zhang, C. M. (2003). Calibrating the degrees of freedom for automatic data smoothing and effective curve checking. J. Amer. Statist. Assoc. 98 609–628.
Mathematical Reviews (MathSciNet): MR2011675
Digital Object Identifier: doi:10.1198/016214503000000521
Zhang, C. M. and Dette, H. (2004). A power comparison between nonparametric regression tests. Statist. Probab. Lett. 66 289–301.
Mathematical Reviews (MathSciNet): MR2045474
Zhang, C. M., Lu, Y., Johnstone, T., Oakes, T. and Davidson, R. (2006). Efficient modeling and inference for event-related fMRI data. Technical report #1125, Dept. Statistics, Univ. Wisconsin-Madison.

2009 © Institute of Mathematical Statistics