Asymptotic results on the length of coalescent trees
Jean-François Delmas, Jean-Stéphane Dhersin, and Arno Siri-Jegousse
Source: Ann. Appl. Probab. Volume 18, Number 3
(2008), 997-1025.
Abstract
We give the asymptotic distribution of the length of partial coalescent trees for Beta and related coalescents. This allows us to give the asymptotic distribution of the number of (neutral) mutations in the partial tree. This is a first step to study the asymptotic distribution of a natural estimator of DNA mutation rate for species with large families.
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Permanent link to this document: http://projecteuclid.org/euclid.aoap/1211819792
Digital Object Identifier: doi:10.1214/07-AAP476
Zentralblatt MATH identifier: 1141.60007
Mathematical Reviews number (MathSciNet): MR2418236
References
[1] Basdevant, A.-L. and Goldschmidt, C. (2007). Asymptotics of the allele frequency spectrum associated with the Bolthausen–Sznitman coalescent. Available at http://fr.arXiv.org/abs/0706.2808.
[2] Berestycki, J., Berestycki, N. and Schweinsberg, J. (2007). Beta-coalescents and continuous stable random trees. Ann. Probab. 35 1835–1887.
Mathematical Reviews (MathSciNet): MR2349577
Digital Object Identifier: doi:10.1214/009117906000001114
Project Euclid: euclid.aop/1189000930
Zentralblatt MATH: 1129.60067
[3] Berestycki, J., Berestycki, N. and Schweinsberg, J. (2007). Small time properties of Beta-coalescents. Ann. Inst. H. Poincaré Probab. Statist. To appear.
Mathematical Reviews (MathSciNet): MR2349577
Digital Object Identifier: doi:10.1214/009117906000001114
Project Euclid: euclid.aop/1189000930
Zentralblatt MATH: 1129.60067
[4] Bertoin, J. (1996). Lévy Processes. Cambridge Univ. Press.
Mathematical Reviews (MathSciNet): MR1406564
[5] Bertoin, J. and Le Gall, J.-F. (2006). Stochastic flows associated to coalescent processes. III. Limit theorems. Illinois J. Math. 50 147–181.
Mathematical Reviews (MathSciNet): MR2247827
[6] Birkner, M., Blath, J., Capaldo, M., Etheridge, A., Möhle, M., Schweinsberg, J. and Wakolbinger, A. (2005). Alpha-stable branching and Beta-coalescents. Electron. J. Probab. 10 303–325.
Mathematical Reviews (MathSciNet): MR2120246
[7] Bolthausen, E. and Sznitman, A.-S. (1998). On Ruelle’s probability cascades and an abstract cavity method. Comm. Math. Phys. 197 247–276.
Mathematical Reviews (MathSciNet): MR1652734
Digital Object Identifier: doi:10.1007/s002200050450
Zentralblatt MATH: 0927.60071
[8] Boom, J. D. G., Boulding, E. G. and Beckenbach, A. T. (1994). Mitochondrial DNA variation in introduced populations of pacific oyster, Crassostrea Gigas, in British Columbia. Can. J. Fish. Aquat. Sci. 51 1608–1614.
[9] Breiman, L. (1992). Probability. SIAM, Philadelphia.
Mathematical Reviews (MathSciNet): MR1163370
Zentralblatt MATH: 0753.60001
[10] Drmota, M., Iksanov, A., Möhle, M. and Rösler, U. (2007). Asymptotic results about the total branch length of the Bolthausen–Sznitman coalescent. Stoch. Process. Appl. 117 1404–1421.
[11] Eldon, B. and Wakeley, J. (2006). Coalescent processes when the distribution of offspring number among individuals is highly skewed. Genetics 172 2621–2633.
[12] Feller, W. (1971). An Introduction to Probability Theory and Its Applications. II. Wiley, New York.
Mathematical Reviews (MathSciNet): MR270403
[13] Gnedin, A. and Yakubovich, Y. (2007). On the number of collisions in Λ-coalescents. Available at http://arXiv.org/abs/0704.3902.
Mathematical Reviews (MathSciNet): MR2365877
[14] Iksanov, A. and Möhle, M. (2007). On a random recursion related to absorption times of death Markov chains. Available at http://arXiv.org/abs/0710.5826.
Mathematical Reviews (MathSciNet): MR2407414
[15] Kallenberg, O. (2002). Foundations of Modern Probability, 2nd ed. Springer, New York.
Mathematical Reviews (MathSciNet): MR1876169
Zentralblatt MATH: 0996.60001
[16] Kimura, M. (1969). The number of heterozygous nucleotide sites maintained in a finite population due to steady flux of mutations. Genetics 61 893–903.
[17] Kingman, J. F. C. (1982). The coalescent. Stochastic Process. Appl. 13 235–248.
Mathematical Reviews (MathSciNet): MR671034
Digital Object Identifier: doi:10.1016/0304-4149(82)90011-4
Zentralblatt MATH: 0491.60076
[18] Kingman, J. F. C. (2000). Origins of the coalescent 1974–1982. Genetics 156 1461–1463.
[19] Möhle, M. (2006). On the number of segregating sites for populations with large family sizes. Adv. in Appl. Probab. 38 750–767.
Mathematical Reviews (MathSciNet): MR2256876
Digital Object Identifier: doi:10.1239/aap/1158685000
Project Euclid: euclid.aap/1158685000
Zentralblatt MATH: 1112.92046
[20] Mukherjea, A., Rao, M. and Suen, S. (2006). A note on moment generating functions. Statist. Probab. Lett. 76 1185–1189.
Mathematical Reviews (MathSciNet): MR2270543
[21] Pitman, J. (1999). Coalescents with multiple collisions. Ann. Probab. 27 1870–1902.
Mathematical Reviews (MathSciNet): MR1742892
Digital Object Identifier: doi:10.1214/aop/1022677552
Project Euclid: euclid.aop/1022874819
Zentralblatt MATH: 0963.60079
[22] Sagitov, S. (1999). The general coalescent with asynchronous mergers of ancestral lines. J. Appl. Probab. 36 1116–1125.
Mathematical Reviews (MathSciNet): MR1742154
Digital Object Identifier: doi:10.1239/jap/1032374759
Project Euclid: euclid.jap/1032374759
Zentralblatt MATH: 0962.92026
[23] Schweinsberg, J. (2003). Coalescent processes obtained from super critical Galton–Watson processes. Stochastic Process. Appl. 106 107–139.
Mathematical Reviews (MathSciNet): MR1983046
[24] Watterson, G. A. (1975). On the number of segregating sites in genetical models without recombination. Theoret. Population Biology 7 256–276.
Mathematical Reviews (MathSciNet): MR366430
Digital Object Identifier: doi:10.1016/0040-5809(75)90020-9
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